RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NAT9Q9BTE0 207 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 EXD2Q9NVH0 621 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 HBS1LQ9Y450 684 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF726A6NNF4 738 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 RECQL5O94762 991 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 MMP3P08254 477 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 LAMP2P13473 410 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ILF3Q12906 894 aaKnown RBP eCLIP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ITIH4Q14624 930 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 UGCGQ16739 394 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 CRYBG2Q8N1P7 616 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 OR10H4Q8NGA5 316 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 A0A1W2PQ72 361 aa17.71■□□□□ 0.42
CACNA1A-227ENST00000636549 HACD1B0YJ81 288 aa17.71■□□□□ 0.42
CACNA1A-227ENST00000636549 HSPA7P48741 367 aa17.71■□□□□ 0.42
CACNA1A-227ENST00000636549 CAP1Q01518 475 aa17.71■□□□□ 0.42
CACNA1A-227ENST00000636549 TTLL10Q6ZVT0 673 aa17.71■□□□□ 0.42
CACNA1A-227ENST00000636549 OR7A2PQ8NGA2 310 aa17.71■□□□□ 0.42
CACNA1A-227ENST00000636549 CXorf56Q9H5V9 222 aa17.71■□□□□ 0.42
CACNA1A-227ENST00000636549 PDP2Q9P2J9 529 aa17.71■□□□□ 0.42
CACNA1A-227ENST00000636549 IL12AP29459 219 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 CLEC6AQ6EIG7 209 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 PYHIN1Q6K0P9 492 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 ZBTB2Q8N680 514 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 C11orf24Q96F05 449 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 ACO2Q99798 780 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 ATXN7L1Q9ULK2 861 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 SNX4O95219 450 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 MAPK12P53778 367 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 PPP4CP60510 307 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 SRYQ05066 204 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 SSX6Q7RTT6 188 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 COQ8AQ8NI60 647 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 EFHD2Q96C19 240 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 MAP3K14Q99558 947 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 CARS2Q9HA77 564 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 CDC123O75794 336 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 CTSKP43235 329 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 CASP5P51878 434 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 TAS2R50P59544 299 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 PEX6Q13608 980 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 ABCA11PQ4W5N1 156 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 TMEM156Q8N614 296 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 TCEANCQ8N8B7 351 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 HTRA1Q92743 480 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 TTYH2Q9BSA4 534 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 MRPS30Q9NP92 439 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 SEC24AO95486 1093 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 ERBB2P04626 1255 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 ITGB1P05556 798 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 SELPP16109 830 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 DSC2Q02487 901 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 PRKCZQ05513 592 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 NUP54Q7Z3B4 507 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 CMC1Q7Z7K0 106 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 MYCBPAPQ8TBZ2 947 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 DTNBP1Q96EV8 351 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 MED14O60244 1454 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 RGSL1A5PLK6 1076 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 hCG_2039718K7EN88 272 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 OR1I1O60431 355 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 MTX2O75431 263 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 ACP5P13686 325 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 GRK5P34947 590 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 TGFBR2P37173 567 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 PPIGQ13427 754 aaKnown RBP eCLIP17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 SLC9A4Q6AI14 798 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 MFSD3Q96ES6 412 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 CERS2Q96G23 380 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 DPEP3Q9H4B8 488 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 ARHGAP20Q9P2F6 1191 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 IRAK3Q9Y616 596 aa17.7■□□□□ 0.42
CACNA1A-227ENST00000636549 OTCP00480 354 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 ACLYP53396 1101 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 LINGO2Q7L985 606 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 FNIP1Q8TF40 1166 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 OR2AG1Q9H205 316 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 C8orf4Q9NR00 106 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 ENOPH1Q9UHY7 261 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 TBC1D30Q9Y2I9 924 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 CLCA3PQ9Y6N3 262 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 RNF17Q9BXT8 1623 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 B4GALT2O60909 372 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 AGXTP21549 392 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 BNIP3Q12983 259 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 LARS2Q15031 903 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 OR7D4Q8NG98 312 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 MFSD14AQ96MC6 490 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 PDP1Q9P0J1 537 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 DKKL1Q9UK85 242 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 A0A0J9YVX5 310 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 MLYCDO95822 493 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 CSTF2P33240 577 aaKnown RBP eCLIP17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 MTTPP55157 894 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 S100ZQ8WXG8 99 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 SYN2Q92777 582 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 CD101Q93033 1021 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 Q96MT0 163 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 KXD1Q9BQD3 176 aa17.69■□□□□ 0.42
CACNA1A-227ENST00000636549 DNAJC18Q9H819 358 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms