RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ZMYND15Q9H091 742 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 STN1Q9H668 368 aaKnown RBP18.15■□□□□ 0.5
CLN6-214ENST00000636314 RDH14Q9HBH5 336 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 PISDQ9UG56 409 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 AAR2Q9Y312 384 aaKnown RBP18.15■□□□□ 0.5
CLN6-214ENST00000636314 PKP3Q9Y446 797 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 ZNF106Q9H2Y7 1883 aaKnown RBP18.15■□□□□ 0.5
CLN6-214ENST00000636314 NAV2Q8IVL1 2488 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 AGRPO00253 132 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 PPM1DO15297 605 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 DDX3YO15523 660 aaKnown RBP18.14■□□□□ 0.49
CLN6-214ENST00000636314 B4GAT1O43505 415 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 VEGFDO43915 354 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 SNX2O60749 519 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 MTX2O75431 263 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 EML2O95834 649 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 JMJD7P0C870 316 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 SLC2A4P14672 509 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 FASLGP48023 281 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 CSRP3P50461 194 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 ZFP36L1Q07352 338 aaKnown RBP18.14■□□□□ 0.49
CLN6-214ENST00000636314 CLPPQ16740 277 aaPredicted RBP18.14■□□□□ 0.49
CLN6-214ENST00000636314 INSCQ1MX18 579 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 PLA2G4EQ3MJ16 856 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 LINC00303Q3SY05 128 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 ATP13A5Q4VNC0 1218 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 SLITRK4Q8IW52 837 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 RNF10Q8N5U6 811 aaKnown RBP18.14■□□□□ 0.49
CLN6-214ENST00000636314 GDAP1Q8TB36 358 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 CCDC110Q8TBZ0 833 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 EXTL1Q92935 676 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 PPP1R2P1Q96PQ5 205 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 OSGEPL1Q9H4B0 414 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 KCNK4Q9NYG8 393 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 IL17CQ9P0M4 197 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 TBC1D29Q9UFV1 150 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 LOXL2Q9Y4K0 774 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 PCDHGA7Q9Y5G6 932 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 ADGRG1Q9Y653 693 aa18.14■□□□□ 0.49
CLN6-214ENST00000636314 TRBV23OR9-2A0A075B6M9 112 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 BUD23O43709 281 aaKnown RBP18.13■□□□□ 0.49
CLN6-214ENST00000636314 KRT86O43790 486 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 AGTP01019 485 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 PPM1FP49593 454 aaPredicted RBP18.13■□□□□ 0.49
CLN6-214ENST00000636314 NFKB2Q00653 900 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 HHEXQ03014 270 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 GTF2H3Q13889 308 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 FAM151BQ6UXP7 276 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 TMPRSS9Q7Z410 1059 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 LRRTM4Q86VH4 590 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 TMEM159Q96B96 161 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 LRRC45Q96CN5 670 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 HES6Q96HZ4 224 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 SLC38A3Q99624 504 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 CMKLR1Q99788 373 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 APOL2Q9BQE5 337 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 NUDT22Q9BRQ3 303 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 IL26Q9NPH9 171 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 KLC4Q9NSK0 619 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLN6-214ENST00000636314 IL17BQ9UHF5 180 aa18.13■□□□□ 0.49
CLN6-214ENST00000636314 IGHV1OR21-1A0A087WYE8 117 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 GLYATL1P3A0A0U1RQE8 302 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 CHUKO15111 745 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 KMOO15229 486 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 STX7O15400 261 aaKnown RBP18.12■□□□□ 0.49
CLN6-214ENST00000636314 PPFIA2O75334 1257 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 CDK14O94921 469 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 F3P13726 295 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 GPLD1P80108 840 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 KLF1Q13351 362 aaPredicted RBP18.12■□□□□ 0.49
CLN6-214ENST00000636314 KHDC1Q4VXA5 237 aaKnown RBP18.12■□□□□ 0.49
CLN6-214ENST00000636314 ARHGEF18Q6ZSZ5 1173 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 ZNF761Q86XN6 746 aaPredicted RBP18.12■□□□□ 0.49
CLN6-214ENST00000636314 CCDC112Q8NEF3 446 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 ZCCHC2Q9C0B9 1178 aaKnown RBP18.12■□□□□ 0.49
CLN6-214ENST00000636314 SEMA6CQ9H3T2 930 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 SARS2Q9NP81 518 aaKnown RBP18.12■□□□□ 0.49
CLN6-214ENST00000636314 AKAP7Q9P0M2 348 aaPredicted RBP18.12■□□□□ 0.49
CLN6-214ENST00000636314 GUCA1BQ9UMX6 200 aa18.12■□□□□ 0.49
CLN6-214ENST00000636314 BSNQ9UPA5 3926 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 KIR2DS5A0A0G2JLQ3 304 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 A0A0G2JNG1 304 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 A6NCN8 305 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 KIR2DS3K7RE56 304 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 LIPCP11150 499 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 CD1CP29017 333 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 ADRA1AP35348 466 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 CLCNKAP51800 687 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 OLIG2Q13516 323 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 ITGA9Q13797 1035 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 KIR2DS5Q14953 304 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 CHRNA6Q15825 494 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 MANEAQ5SRI9 462 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.11■□□□□ 0.49
CLN6-214ENST00000636314 SEL1L2Q5TEA6 688 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 NKAIN2Q5VXU1 208 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 IYDQ6PHW0 289 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 XKR5Q6UX68 686 aa18.11■□□□□ 0.49
CLN6-214ENST00000636314 RANBP10Q6VN20 620 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms