RNA–Protein interactions for RNA: ENST00000633167.1

PHACTR4-208, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 5

Gene PHACTR4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-208ENST00000633167 COG2Q14746 738 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 RASA2Q15283 850 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 SYT16Q17RD7 645 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 C14orf177Q52M58 125 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 IZUMO3Q5VZ72 239 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 CCSAPQ6IQ19 270 aaPredicted RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 KIAA1324Q6UXG2 1013 aaKnown RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 LRRC31Q6UY01 552 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 RPAP2Q8IXW5 612 aaPredicted RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 VPS52Q8N1B4 723 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 LRRC43Q8N309 656 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 TEX9Q8N6V9 391 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 PAF1Q8N7H5 531 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 TRIM58Q8NG06 486 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 LNX1Q8TBB1 728 aaPredicted RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 C2CD4CQ8TF44 421 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 ANKRD49Q8WVL7 239 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 RBM41Q96IZ5 413 aaKnown RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 CABS1Q96KC9 395 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 ZMAT2Q96NC0 199 aaKnown RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 LRFN5Q96NI6 719 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 SPAG5Q96R06 1193 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 PIGSQ96S52 555 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 LBHD1Q9BQE6 289 aaPredicted RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 OSBPL10Q9BXB5 764 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 UPF3BQ9BZI7 483 aaKnown RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 XPO4Q9C0E2 1151 aaKnown RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 SYNCQ9H7C4 482 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 RRP7BPQ9NSQ0 103 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 PAIP2BQ9ULR5 123 aaKnown RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 ZNF148Q9UQR1 794 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 ZNF510Q9Y2H8 683 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 DAAM1Q9Y4D1 1078 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 PTPRZ1P23471 2315 aaPredicted RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 COL4A5P29400 1685 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 GCC2Q8IWJ2 1684 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 QRICH2Q9H0J4 1663 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 REV3LO60673 3130 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 ANKRD17O75179 2603 aaKnown RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 TP53BP1Q12888 1972 aaPredicted RBP3□□□□□ -1.93
PHACTR4-208ENST00000633167 CPDO75976 1380 aa3□□□□□ -1.93
PHACTR4-208ENST00000633167 C5orf42Q9H799 3197 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 FAM208BQ5VWN6 2430 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 USP54Q70EL1 1684 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 SCN4AP35499 1836 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 A0A1W2PRQ8 180 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 ERICH2A1L162 156 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CPED1A4D0V7 1026 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 HNRNPCL2B2RXH8 293 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 RASA4BC9J798 803 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 FAM157AC9JC47 383 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 PIP5K1BO14986 540 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 RASA4O43374 803 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 SLC22A3O75751 556 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 ZNF189O75820 626 aaPredicted RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 HEXIM1O94992 359 aaKnown RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 STAMBPO95630 424 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 FGFR1OPO95684 399 aaKnown RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CCDC166P0CW27 439 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 HNRNPH1P31943 449 aaKnown RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 KIF5BP33176 963 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 DDIT3P35638 169 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 KRT2P35908 639 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 GNL1P36915 607 aaPredicted RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 UBXN2AP68543 259 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 BASP1P80723 227 aaKnown RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 SP3Q02447 781 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CYP4A11Q02928 519 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 PPIDQ08752 370 aaKnown RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 SREBF2Q12772 1141 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CUL3Q13618 768 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 TNFAIP1Q13829 316 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 UBE4AQ14139 1066 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 FAM133BQ5BKY9 247 aaKnown RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 SPATA1Q5VX52 437 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 ADALQ6DHV7 355 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 THOC7Q6I9Y2 204 aaKnown RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 FAM122CQ6P4D5 195 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 C19orf48Q6RUI8 117 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CCDC129Q6ZRS4 1044 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 RUFY3Q7L099 469 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 RNF144BQ7Z419 303 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 IQCA1Q86XH1 822 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 ITPRIPQ8IWB1 547 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 LSMEM2Q8N112 164 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 OR2C3Q8N628 320 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 ARL10Q8N8L6 244 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 SCAIQ8N9R8 606 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 APPL2Q8NEU8 664 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CCDC110Q8TBZ0 833 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 BRSK1Q8TDC3 778 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 PARD3BQ8TEW8 1205 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 U2AF1L4Q8WU68 220 aaKnown RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CTNNBL1Q8WYA6 563 aaPredicted RBP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 TRIB2Q92519 343 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CDKL2Q92772 493 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 ERP27Q96DN0 273 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CFAP36Q96G28 342 aa2.99□□□□□ -1.93
PHACTR4-208ENST00000633167 CGREF1Q99674 301 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms