RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 IQCMA0A1B0GVH7 501 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 UGT2B11O75310 529 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 RASGRP1O95267 797 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 POP4O95707 220 aaKnown RBP12.71□□□□□ -0.37
SCN8A-209ENST00000627620 MT-CYBP00156 380 aaPredicted RBP12.71□□□□□ -0.37
SCN8A-209ENST00000627620 GOT2P00505 430 aaKnown RBP12.71□□□□□ -0.37
SCN8A-209ENST00000627620 NMBRP28336 390 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 XIAPP98170 497 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 DPYSQ14117 519 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 GALNT5Q7Z7M9 940 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 PDP1Q9P0J1 537 aaPredicted RBP12.71□□□□□ -0.37
SCN8A-209ENST00000627620 ZNF180Q9UJW8 692 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 C2CD4BA6NLJ0 364 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 LMO2P25791 158 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 GTF2H2Q13888 395 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 ATP13A5Q4VNC0 1218 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 TSTD2Q5T7W7 516 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 DENND5AQ6IQ26 1287 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 GTF2H2CQ6P1K8 395 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 ZNF730Q6ZMV8 503 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 SERPINA9Q86WD7 417 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 TMEM139Q8IV31 216 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 ING5Q8WYH8 240 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 EXOSC8Q96B26 276 aaKnown RBP12.71□□□□□ -0.37
SCN8A-209ENST00000627620 MCRS1Q96EZ8 462 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 PDCD10Q9BUL8 212 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 CPQQ9Y646 472 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 FAM86C2PA6NEL3 165 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 SIN3BO75182 1162 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 LCP2Q13094 533 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 GCNT6Q5T4J0 391 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 VWA5B1Q5TIE3 1220 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 ESRP1Q6NXG1 681 aaKnown RBP12.71□□□□□ -0.38
SCN8A-209ENST00000627620 LRRC57Q8N9N7 239 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 WDR60Q8WVS4 1066 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 APOBEC3GQ9HC16 384 aaKnown RBP12.71□□□□□ -0.38
SCN8A-209ENST00000627620 OSER1Q9NX31 292 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 MAP4K5Q9Y4K4 846 aa12.71□□□□□ -0.38
SCN8A-209ENST00000627620 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 IGFALSP35858 605 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 RABGGTBP53611 331 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 DAOAP59103 153 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 OAFQ86UD1 273 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 CDH24Q86UP0 819 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 SRFBP1Q8NEF9 429 aaKnown RBP12.7□□□□□ -0.38
SCN8A-209ENST00000627620 OR2T34Q8NGX1 318 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 OR2T3Q8NH03 318 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 SLC9A6Q92581 669 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 S100A14Q9HCY8 104 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 ERVW-1Q9UQF0 538 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 AP1S1P61966 158 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 ZBTB6Q15916 424 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 MED27Q6P2C8 311 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 POMZP3Q6PJE2 187 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 RTL4Q6ZR62 310 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 ZBTB46Q86UZ6 589 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 FBXO22Q8NEZ5 403 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 PSMG2Q969U7 264 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 UBAP1Q9NZ09 502 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 FZD10Q9ULW2 581 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 FADS3Q9Y5Q0 445 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 AK5Q9Y6K8 562 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 NT5EP21589 574 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 LAPTM5Q13571 262 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 NDUFA9Q16795 377 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 RBM15BQ8NDT2 890 aaKnown RBP12.7□□□□□ -0.38
SCN8A-209ENST00000627620 OR10H5Q8NGA6 315 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 DNASE1L2Q92874 299 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 PLD4Q96BZ4 506 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 TCF25Q9BQ70 676 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 CCDC177Q9NQR7 707 aaPredicted RBP12.7□□□□□ -0.38
SCN8A-209ENST00000627620 NECTIN3Q9NQS3 549 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 CDH22Q9UJ99 828 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 IRGMA1A4Y4 181 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 PGRMC2O15173 223 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 FSTL4Q6MZW2 842 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCN8A-209ENST00000627620 CERS4Q9HA82 394 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 TMEM27Q9HBJ8 222 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 FBXW11Q9UKB1 542 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 ELOVL7A1L3X0 281 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 FOXO6A8MYZ6 492 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 SAGP10523 405 aaPredicted RBP12.7□□□□□ -0.38
SCN8A-209ENST00000627620 UROSP10746 265 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 PTPN2P17706 415 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 RPL17P18621 184 aaKnown RBP12.7□□□□□ -0.38
SCN8A-209ENST00000627620 ALAS2P22557 587 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 ERVK-21P61565 698 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 IL10RBQ08334 325 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 PLEKHG4Q58EX7 1191 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 ALKBH2Q6NS38 261 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 S100ZQ8WXG8 99 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 CLPTM1LQ96KA5 538 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 C5orf34Q96MH7 638 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 HEPHQ9BQS7 1158 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 CDADC1Q9BWV3 514 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 COMMD3-BMI1R4GMX3 469 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
SCN8A-209ENST00000627620 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms