RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ACTR1AP61163 376 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 SIM1P81133 766 aaPredicted RBP20.03■□□□□ 0.8
PTCD3-220ENST00000627371 SLC30A9Q6PML9 568 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 TAS2R42Q7RTR8 314 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 SERPINA9Q86WD7 417 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 TRAPPC5Q8IUR0 188 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 ZNF547Q8IVP9 402 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 PIANPQ8IYJ0 282 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 AGGF1Q8N302 714 aaeCLIP20.03■□□□□ 0.8
PTCD3-220ENST00000627371 BBOF1Q8ND07 529 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 MNS1Q8NEH6 495 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 FAM46DQ8NEK8 389 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 OR6P1Q8NGX9 317 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 OR4L1Q8NH43 312 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.03■□□□□ 0.8
PTCD3-220ENST00000627371 MFSD3Q96ES6 412 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 COPS8Q99627 209 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 ZDHHC3Q9NYG2 299 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 NCKIPSDQ9NZQ3 722 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 TAAR2Q9P1P5 351 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 GPR34Q9UPC5 381 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 SNX24Q9Y343 169 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 SPTBN2O15020 2390 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 IGLV3-16A0A075B6K0 115 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 LY6G6EA0A0G2JKS1 128 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 FAM237BA0A1B0GVD1 139 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 TP73O15350 636 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 RALBP11234 206 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 CKMT1AP12532 417 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 CKMT2P17540 419 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 CTSCP53634 463 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 DAB2P98082 770 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 B4GALNT1Q00973 533 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 DNAJC3Q13217 504 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 C11orf96Q7Z7L8 435 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 ARL10Q8N8L6 244 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 GLMNQ92990 594 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 DCUN1D1Q96GG9 259 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 ZNF514Q96K75 400 aaPredicted RBP20.02■□□□□ 0.8
PTCD3-220ENST00000627371 SIGLEC10Q96LC7 697 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 TIMM29Q9BSF4 260 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 RAB17Q9H0T7 212 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 EVA1BQ9NVM1 165 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 TOR4AQ9NXH8 423 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 U3KQA8 63 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 RP1P56715 2156 aa20.02■□□□□ 0.8
PTCD3-220ENST00000627371 CACNA1AO00555 2505 aa20.02■□□□□ 0.79
PTCD3-220ENST00000627371 ASXL3Q9C0F0 2248 aa20.02■□□□□ 0.79
PTCD3-220ENST00000627371 OR2AG2A6NM03 316 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 CFAP99D6REC4 459 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 ACP1P24666 158 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 ACADVLP49748 655 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 CLCNKAP51800 687 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 ITIH4Q14624 930 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 DBN1Q16643 649 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 INSCQ1MX18 579 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 PLA2G4EQ3MJ16 856 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 FASTKD1Q53R41 847 aaKnown RBP20.01■□□□□ 0.79
PTCD3-220ENST00000627371 DNAJC21Q5F1R6 531 aaKnown RBP20.01■□□□□ 0.79
PTCD3-220ENST00000627371 FNBP1LQ5T0N5 605 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 DUPD1Q68J44 220 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 KIAA0930Q6ICG6 404 aaPredicted RBP20.01■□□□□ 0.79
PTCD3-220ENST00000627371 C8orf74Q6P047 294 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 OGFOD3Q6PK18 319 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 TMEM220Q6QAJ8 160 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 CES3Q6UWW8 571 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 TMEM135Q86UB9 458 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 SLC35F3Q8IY50 421 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 KYQ8NBH2 561 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 CCDC97Q96F63 343 aaPredicted RBP20.01■□□□□ 0.79
PTCD3-220ENST00000627371 DPEP2Q9H4A9 486 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 SPATS2LQ9NUQ6 558 aaKnown RBP20.01■□□□□ 0.79
PTCD3-220ENST00000627371 SIRPGQ9P1W8 387 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 WHRNQ9P202 907 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 ANAPC5Q9UJX4 755 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 KCNK6Q9Y257 313 aa20.01■□□□□ 0.79
PTCD3-220ENST00000627371 UTP11Q9Y3A2 253 aaKnown RBP20.01■□□□□ 0.79
PTCD3-220ENST00000627371 CTAGE15A4D2H0 777 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 B4DGG1 531 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 FTH1P19P0C7X4 201 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 CTAGE8P0CG41 777 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 ATP1B2P14415 290 aaPredicted RBP20■□□□□ 0.79
PTCD3-220ENST00000627371 ZNF7P17097 686 aaPredicted RBP20■□□□□ 0.79
PTCD3-220ENST00000627371 PAMP19021 973 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 ARNTP27540 789 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 RPIAP49247 311 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 DUSP3P51452 185 aaPredicted RBP20■□□□□ 0.79
PTCD3-220ENST00000627371 DHX9Q08211 1270 aaKnown RBP20■□□□□ 0.79
PTCD3-220ENST00000627371 CALCOCO2Q13137 446 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 NR0B2Q15466 257 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 BCL7AQ4VC05 210 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 LYPLAL1Q5VWZ2 237 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 CERS6Q6ZMG9 384 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 DET1Q7L5Y6 550 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 CTAGE6Q86UF2 777 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 CTAGE4Q8IX94 777 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 PDIK1LQ8N165 341 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 GPR156Q8NFN8 814 aa20■□□□□ 0.79
PTCD3-220ENST00000627371 ZNF669Q96BR6 464 aaPredicted RBP20■□□□□ 0.79
PTCD3-220ENST00000627371 SGF29Q96ES7 293 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms