RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	TRMT112	Q9UI30	125 aa	Known RBP	5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	ZSWIM8	A7E2V4	1837 aa		5.81	□□□□□ -1.48
NRXN1-223	ENST00000625891	ZNF521	Q96K83	1311 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	LOC100509620	A0A075B734	347 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891		A0A096LPK6	155 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891		A0A1W2PQF6	199 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	GLOD5	A6NK44	160 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	ENTPD3	O75355	529 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	SLC25A12	O75746	678 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	SEC31A	O94979	1220 aa	Known RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	TF	P02787	698 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	KRT10	P13645	584 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	HOXB2	P14652	356 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	EDN2	P20800	178 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	AVPR1A	P37288	418 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	CXCR3	P49682	368 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	TFAP4	Q01664	338 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	GRAP	Q13588	217 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	SHB	Q15464	509 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	HECTD3	Q5T447	861 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	C1QTNF12	Q5T7M4	302 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	GKAP1	Q5VSY0	366 aa	Predicted RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	HEPHL1	Q6MZM0	1159 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	GLDN	Q6ZMI3	551 aa	Predicted RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	USP50	Q70EL3	339 aa	Predicted RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	G2E3	Q7L622	706 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	DNAAF5	Q86Y56	855 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	CAMK1D	Q8IU85	385 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	RBFA	Q8N0V3	343 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	SCML4	Q8N228	414 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	SYT2	Q8N9I0	419 aa	Predicted RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	TEX45	Q8NA69	505 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	RASSF8	Q8NHQ8	419 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	GABPB2	Q8TAK5	448 aa	Predicted RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	GRAPL	Q8TC17	118 aa	Predicted RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	MMAB	Q96EY8	250 aa	Predicted RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	URB1-AS1	Q96HZ7	61 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	NLRP4	Q96MN2	994 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	WDFY2	Q96P53	400 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	APOL6	Q9BWW8	343 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	POLDIP3	Q9BY77	421 aa	Known RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	EDEM3	Q9BZQ6	932 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	POT1	Q9NUX5	634 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	ARGLU1	Q9NWB6	273 aa	Predicted RBP	5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	CARD8	Q9Y2G2	431 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	FAM169A	Q9Y6X4	670 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	AKAP11	Q9UKA4	1901 aa		5.8	□□□□□ -1.48
NRXN1-223	ENST00000625891	CACNA1I	Q9P0X4	2223 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	IFNL4	K9M1U5	179 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	UBE2C	O00762	179 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	HCRTR2	O43614	444 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	SLC25A17	O43808	307 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	ECE2	O60344	883 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	MMP3	P08254	477 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	ENO3	P13929	434 aa	Predicted RBP	5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	GNLY	P22749	145 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	RFC1	P35251	1148 aa	Predicted RBP	5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	HSD17B4	P51659	736 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	CEBPZ	Q03701	1054 aa	Known RBP	5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	TNFAIP1	Q13829	316 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	PTGR1	Q14914	329 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	KYNU	Q16719	465 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	ZSCAN23	Q3MJ62	389 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	WASHC2D	Q5SRD0	308 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	NCAPH2	Q6IBW4	605 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	COLCA1	Q6ZS62	124 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	HACE1	Q8IYU2	909 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	TBC1D16	Q8TBP0	767 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	TMEM163	Q8TC26	289 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	ATP6V1E2	Q96A05	226 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	MOAP1	Q96BY2	351 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	TMEM68	Q96MH6	324 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	ADPGK	Q9BRR6	497 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	C1QTNF1	Q9BXJ1	281 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	AAR2	Q9Y312	384 aa	Known RBP	5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891	FAM96B	Q9Y3D0	163 aa		5.79	□□□□□ -1.48
NRXN1-223	ENST00000625891		A8MV72	311 aa	Predicted RBP	5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891		I6L893	689 aa	Predicted RBP	5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	CTDSP2	O14595	271 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	HS6ST1	O60243	411 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	MT-CYB	P00156	380 aa	Predicted RBP	5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	IGKV5-2	P06315	115 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	QDPR	P09417	244 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	SCG2	P13521	617 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	SRD5A1	P18405	259 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	GABRB1	P18505	474 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	CTNNA1	P35221	906 aa	Known RBP	5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	SLC15A1	P46059	708 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	NRIP1	P48552	1158 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	RGS19	P49795	217 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	HUNK	P57058	714 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	CLDN2	P57739	230 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	PRTG	Q2VWP7	1150 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	PARP10	Q53GL7	1025 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	PPP1R42	Q7Z4L9	355 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	TMEM199	Q8N511	208 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	C7orf57	Q8NEG2	295 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	GSDMB	Q8TAX9	411 aa		5.78	□□□□□ -1.48
NRXN1-223	ENST00000625891	LPAR1	Q92633	364 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms