RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 C2orf81A6NN90 581 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 TMEM189-UBE2V1I3L0A0 370 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 GIPC1O14908 333 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 VPS26AO75436 327 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 FCGR1AP12314 374 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 PKMP14618 531 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 CTBSQ01459 385 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 TRIM71Q2Q1W2 868 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 SPATS1Q496A3 300 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 OR56A4Q8NGH8 313 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 ISOC1Q96CN7 298 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 PSKH2Q96QS6 385 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 C1QTNF3Q9BXJ4 246 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 RPF2Q9H7B2 306 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 SARS2Q9NP81 518 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 UBA2Q9UBT2 640 aaPredicted RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 SUN2Q9UH99 717 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 TRMT6Q9UJA5 497 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 PTBP2Q9UKA9 531 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 GABRQQ9UN88 632 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 PLXNA3P51805 1871 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 TRIM64CA6NLI5 447 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 INSIG1O15503 277 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 KLK8O60259 260 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 SYNCRIPO60506 623 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 ARL1P40616 181 aaPredicted RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 GALK1P51570 392 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 RPS24P62847 133 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 ERVK-8P63133 956 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 GRIK2Q13002 908 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 ZBED5Q49AG3 693 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 CTSL3PQ5NE16 218 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 C6orf136Q5SQH8 315 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 TXNDC11Q6PKC3 985 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 SLC2A7Q6PXP3 512 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 GPRIN3Q6ZVF9 776 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 SLC24A5Q71RS6 500 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 GPSM1Q86YR5 675 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 RASAL3Q86YV0 1011 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 DHRSXQ8N5I4 330 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 OR52B6Q8NGF0 335 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 RNF217Q8TC41 542 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 PROKR1Q8TCW9 393 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 LINC01599Q8WXQ3 324 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 LINGO1Q96FE5 620 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 VPS50Q96JG6 964 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 GPR62Q9BZJ7 368 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 ARHGAP39Q9C0H5 1083 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 MAGEH1Q9H213 219 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 MUC13Q9H3R2 512 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 TSR3Q9UJK0 312 aaKnown RBP11.15□□□□□ -0.62
VARS2-213ENST00000625423 PDE4DIPQ5VU43 2346 aa11.15□□□□□ -0.62
VARS2-213ENST00000625423 E2F3O00716 465 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 SEPT4O43236 478 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 SNAP29O95721 258 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 HRH2P25021 359 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 VARSP26640 1264 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 MC4RP32245 332 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 STT3AP46977 705 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 EEFSECP57772 596 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 OR4D2P58180 307 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 PDCD4Q53EL6 469 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 EFL1Q7Z2Z2 1120 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 RALGPS2Q86X27 583 aaPredicted RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 CPNE9Q8IYJ1 553 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 TBC1D21Q8IYX1 336 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 EFHBQ8N7U6 833 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 NUDT8Q8WV74 236 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 BIRC7Q96CA5 298 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 PLEKHG4BQ96PX9 1271 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 HBEGFQ99075 208 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 SCUBE2Q9NQ36 999 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 SMPD3Q9NY59 655 aaPredicted RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 CDC14AQ9UNH5 594 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 A0A0J9YVX5 310 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 MTMR11A4FU01 709 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 IQCF5A8MTL0 148 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 SYN3O14994 580 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 GPR39O43194 453 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 EOMESO95936 686 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 LDLRP01130 860 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 CAPGP40121 348 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 RPS9P46781 194 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 MRPL19P49406 292 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 ADARP55265 1226 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 OXCT1P55809 520 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 IL2P60568 153 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 PYCR3Q53H96 274 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 CYBRD1Q53TN4 286 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 ZRANB3Q5FWF4 1079 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 TBPL2Q6SJ96 375 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 RSPO2Q6UXX9 243 aaPredicted RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 Q6ZSR9 355 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 CD200R1Q8TD46 325 aa11.14□□□□□ -0.63
VARS2-213ENST00000625423 C12orf43Q96C57 262 aaKnown RBP11.14□□□□□ -0.63
VARS2-213ENST00000625423 RNF145Q96MT1 663 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms