RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PHGDHO43175 533 aaKnown RBP17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 NIPSNAP2O75323 286 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 ATP1B2P14415 290 aaPredicted RBP17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 FDXRP22570 491 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 HNRNPA2B1P22626 353 aaKnown RBP17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 HOXA6P31267 233 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 AKT2P31751 481 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 HPDP32754 393 aaPredicted RBP17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 RAB10P61026 200 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 CDK3Q00526 305 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 CEP97Q8IW35 865 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 SNX19Q92543 992 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 FAM136AQ96C01 138 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 BIRC7Q96CA5 298 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 ZCCHC2Q9C0B9 1178 aaKnown RBP17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 PCMTD2Q9NV79 361 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 MBD1Q9UIS9 605 aaPredicted RBP17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 OR1A2Q9Y585 309 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 ACTL7BQ9Y614 415 aa17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 OAS3Q9Y6K5 1087 aaKnown RBP17.61■□□□□ 0.41
PTCHD3-202ENST00000622555 A6NNZ2 444 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 E5RI56 91 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 H3BMM5 538 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 FPGTO14772 594 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 CREB1P16220 341 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 CHRM3P20309 590 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 TRIM23P36406 574 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 MAGEA12P43365 314 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 TMEM115Q12893 351 aaPredicted RBP17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 ZNF460Q14592 562 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 TUBB8Q3ZCM7 444 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 MACC1Q6ZN28 852 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 PIM3Q86V86 326 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 ACMSDQ8TDX5 336 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 COX14Q96I36 57 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 TEX101Q9BY14 249 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 OR2AG1Q9H205 316 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 VPS11Q9H270 941 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 PHPT1Q9NRX4 125 aaPredicted RBP17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 TAS2R13Q9NYV9 303 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 TLK1Q9UKI8 766 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 CA5BQ9Y2D0 317 aa17.6■□□□□ 0.41
PTCHD3-202ENST00000622555 ABCA7Q8IZY2 2146 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 A0A096LPK6 155 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 IQCF5A8MTL0 148 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 MAP3K13O43283 966 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 VPS26AO75436 327 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 ASMTLO95671 621 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 MPOP05164 745 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 OR56A5P0C7T3 313 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 BRAFP15056 766 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 ITGB6P18564 788 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 CRABP2P29373 138 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 FNTBP49356 437 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 CLDN2P57739 230 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 RPL6Q02878 288 aaKnown RBP17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 ZKSCAN8Q15776 578 aaPredicted RBP17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 TAF1BQ53T94 588 aaPredicted RBP17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 PPM1JQ5JR12 505 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 DOK6Q6PKX4 331 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 SLC36A4Q6YBV0 504 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 ADGRG6Q86SQ4 1221 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 C1orf210Q8IVY1 113 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 DEFB119Q8N690 84 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 RASGEF1AQ8N9B8 481 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 KCNJ9Q92806 393 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 SGF29Q96ES7 293 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 LGR4Q9BXB1 951 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 EBF2Q9HAK2 575 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 TRIM39Q9HCM9 518 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 SARS2Q9NP81 518 aaKnown RBP17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 MED16Q9Y2X0 877 aa17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.59■□□□□ 0.41
PTCHD3-202ENST00000622555 OR2AG2A6NM03 316 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 SPAG7O75391 227 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 CDK14O94921 469 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 AP2A2O94973 939 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 TRIM16O95361 564 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 C2P06681 752 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 NUDT1P36639 197 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 CCNFP41002 786 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 TIAL1Q01085 375 aaKnown RBP eCLIP17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 CSTF1Q05048 431 aaKnown RBP17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 SLC18A2Q05940 514 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 PDAP1Q13442 181 aaKnown RBP17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 GTF2H3Q13889 308 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 PDE1CQ14123 709 aaPredicted RBP17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 SH2D5Q6ZV89 423 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 FBXL6Q8N531 539 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 DTWD2Q8NBA8 298 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 FUBP1Q96AE4 644 aaKnown RBP17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 CABS1Q96KC9 395 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 GPR21Q99679 349 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 APOOQ9BUR5 198 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 SLC13A1Q9BZW2 595 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 PCED1AQ9H1Q7 454 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 GPAMQ9HCL2 828 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 KCNK9Q9NPC2 374 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 ATXN10Q9UBB4 475 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 DMTF1Q9Y222 760 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms