RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 LRRC8EQ6NSJ5 796 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 TAF2Q6P1X5 1199 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 METTL7BQ6UX53 244 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PAGE2Q7Z2X7 111 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 R3HCC1LQ7Z5L2 792 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 TLK2Q86UE8 772 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CDH24Q86UP0 819 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PLD3Q8IV08 490 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MICU2Q8IYU8 434 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 TMEM199Q8N511 208 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 C12orf29Q8N999 325 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 KCT2Q8NC54 265 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 FAM83FQ8NEG4 500 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 OR10T2Q8NGX3 314 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 KCTD4Q8WVF5 259 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 COPS5Q92905 334 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 GPR20Q99678 358 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CNPY3Q9BT09 278 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CCDC32Q9BV29 185 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ROGDIQ9GZN7 287 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CXCL16Q9H2A7 254 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 NTN4Q9HB63 628 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ASNSD1Q9NWL6 643 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CCDC59Q9P031 241 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 TMEM181Q9P2C4 612 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MID2Q9UJV3 735 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MKLN1Q9UL63 735 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 RIMKLBQ9ULI2 386 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PDE10AQ9Y233 779 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MFHAS1Q9Y4C4 1052 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 NME7Q9Y5B8 376 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 GJA3Q9Y6H8 435 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 EVPLQ92817 2033 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PAPPA2Q9BXP8 1791 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MCM3APO60318 1980 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PNMA8CA0A1B0GUJ8 204 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PRORSD1PA6NEY8 169 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ZNF98A6NK75 572 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 LOC110117498-PIK3R3F6TDL0 507 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 F8W810 466 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 STX7O15400 261 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ZNF623O75123 536 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PTP4A3O75365 173 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 SCO1O75880 301 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MED26O95402 600 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 IFNA14P01570 189 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 RPS17P08708 135 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 HTR1AP08908 422 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 STAG3L1P0CL83 205 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CYP2A6P11509 494 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ATP6V1B2P21281 511 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 TGM2P21980 687 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 F8A1P23610 371 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ETV6P41212 452 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MLLT3P42568 568 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MAGEA3P43357 314 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MAGEA6P43360 314 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ATXN1P54253 815 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CYP4F2P78329 520 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CYP4F3Q08477 520 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 FAPQ12884 760 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PDK2Q15119 407 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 COLEC12Q5KU26 742 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 LCN8Q6JVE9 175 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 SCYL2Q6P3W7 929 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CYP2R1Q6VVX0 501 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 AMIGO1Q86WK6 493 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 KIF18BQ86Y91 864 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 C8orf59Q8N0T1 100 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CCNYL1Q8N7R7 359 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 NETO2Q8NC67 525 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 C7orf57Q8NEG2 295 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ST13P5Q8NFI4 369 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 TRPM4Q8TD43 1214 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 SLC22A17Q8WUG5 538 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 KHSRPQ92945 711 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 KLRG1Q96E93 195 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CPB2Q96IY4 423 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MYRFLQ96LU7 910 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 SNRNP25Q9BV90 132 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 FTHL17Q9BXU8 183 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ILKAPQ9H0C8 392 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 FAM49AQ9H0Q0 323 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 VPS33BQ9H267 617 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 MUC13Q9H3R2 512 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 RNPEPQ9H4A4 650 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 RPF1Q9H9Y2 349 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 GBA2Q9HCG7 927 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 POLR3BQ9NW08 1133 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PAK5Q9P286 719 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 SRRDQ9UH36 339 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 USP22Q9UPT9 525 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 BTBD3Q9Y2F9 522 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PRELID3BQ9Y3B1 194 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 RAP2CQ9Y3L5 183 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 COPG1Q9Y678 874 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CACNG2Q9Y698 323 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 A0A1W2PRG6 482 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 C19orf81C9J6K1 198 aa7.43□□□□□ -1.22
TRIM49B-202ENST00000622138 APOL1O14791 398 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms