RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 MAFAQ8NHW3 353 aaPredicted RBP17.32■□□□□ 0.36
FAM3A-222ENST00000621967 BRSK1Q8TDC3 778 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 SUSD6Q92537 303 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 ROPN1LQ96C74 230 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 RPRD1AQ96P16 312 aaPredicted RBP17.32■□□□□ 0.36
FAM3A-222ENST00000621967 ATOH8Q96SQ7 321 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 KLF16Q9BXK1 252 aaPredicted RBP17.32■□□□□ 0.36
FAM3A-222ENST00000621967 TDP1Q9NUW8 608 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 PCDHGB4Q9UN71 923 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 PCDHGB5Q9Y5G0 923 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 DNAJC15Q9Y5T4 150 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 ARL5AQ9Y689 179 aa17.32■□□□□ 0.36
FAM3A-222ENST00000621967 BBIP1A8MTZ0 92 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 TNFAIP8O95379 198 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 TFAP2AP05549 437 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 TSPAN8P19075 237 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 RPL5P46777 297 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 KCNQ1P51787 676 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 RALGDSQ12967 914 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 MTA1Q13330 715 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 OR4D1Q15615 310 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 FAM219BQ5XKK7 198 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 PTGR2Q8N8N7 351 aaPredicted RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 SLCO4A1Q96BD0 722 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 ZFRQ96KR1 1074 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 AARSD1Q9BTE6 412 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 FBRSL1Q9HCM7 1045 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 LSM7Q9UK45 103 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 DENND4AQ7Z401 1863 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 ATP6AP2A0A1C7CYW4 349 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 ATP6AP2O75787 350 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 STC2O76061 302 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 PRAMEF12O95522 483 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 SLC4A1P02730 911 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 CALRP27797 417 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 SLC7A1P30825 629 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 OR1E1P30953 314 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 STC1P52823 247 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 STX1BP61266 288 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 ZNF235Q14590 738 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 PTPRCAPQ14761 206 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 KANK2Q63ZY3 851 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 NADSYN1Q6IA69 706 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 SNX31Q8N9S9 440 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 OR13C4Q8NGS5 318 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 BLOC1S5Q8TDH9 187 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 SMARCD2Q92925 531 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 MYEOVQ96EZ4 313 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 CNBD2Q96M20 576 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 ZNF599Q96NL3 588 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 TRIB3Q96RU7 358 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 MRPS26Q9BYN8 205 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 TFB2MQ9H5Q4 396 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 AKTIPQ9H8T0 292 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 CATSPERZQ9NTU4 200 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 CFAP97Q9P2B7 532 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 CCL26Q9Y258 94 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 SH3BP1Q9Y3L3 701 aa17.31■□□□□ 0.36
FAM3A-222ENST00000621967 HELZP42694 1942 aaKnown RBP17.31■□□□□ 0.36
FAM3A-222ENST00000621967 GRXCR2A6NFK2 248 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 LEFTY2O00292 366 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 MBTPS2O43462 519 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 PGM3O95394 542 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 CORO1AP31146 461 aaKnown RBP17.3■□□□□ 0.36
FAM3A-222ENST00000621967 CDH13P55290 713 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 C5orf22Q49AR2 442 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 C6orf52Q5T4I8 152 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 PHYKPLQ8IUZ5 450 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 GALNT4Q8N4A0 578 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 OR4L1Q8NH43 312 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 ZNF597Q96LX8 424 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 MYADMQ96S97 322 aa17.3■□□□□ 0.36
FAM3A-222ENST00000621967 GPATCH1Q9BRR8 931 aaKnown RBP17.3■□□□□ 0.36
FAM3A-222ENST00000621967 INTS10Q9NVR2 710 aaKnown RBP17.3■□□□□ 0.36
FAM3A-222ENST00000621967 NUP210Q8TEM1 1887 aaPredicted RBP17.3■□□□□ 0.36
FAM3A-222ENST00000621967 H3BMM5 538 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 UBXN8O00124 270 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 AZIN1O14977 448 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 CLPTM1O96005 669 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 ZXDBP98169 803 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 APOFQ13790 326 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 GK3PQ14409 553 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 GALNT3Q14435 633 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 EML3Q32P44 896 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 FAM78AQ5JUQ0 283 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 RAB44Q7Z6P3 723 aaPredicted RBP17.29■□□□□ 0.36
FAM3A-222ENST00000621967 RETREG3Q86VR2 466 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 CHERPQ8IWX8 916 aaKnown RBP17.29■□□□□ 0.36
FAM3A-222ENST00000621967 ASB16Q96NS5 453 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 VCX3AQ9NNX9 186 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 ABCD2Q9UBJ2 740 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 PADI4Q9UM07 663 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 ZFP37Q9Y6Q3 630 aaPredicted RBP17.29■□□□□ 0.36
FAM3A-222ENST00000621967 ZFC3H1O60293 1989 aaKnown RBP17.29■□□□□ 0.36
FAM3A-222ENST00000621967 SIX3O95343 332 aaPredicted RBP17.29■□□□□ 0.36
FAM3A-222ENST00000621967 NDST3O95803 873 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 MT-CO1P00395 513 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 SERPINF2P08697 491 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 FAM58BPP0C7Q3 252 aa17.29■□□□□ 0.36
FAM3A-222ENST00000621967 TACR2P21452 398 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms