RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 MTRRQ9UBK8 725 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 GPN3Q9UHW5 284 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 PHF24Q9UPV7 400 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 MFHAS1Q9Y4C4 1052 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 A0A0G2JN53 185 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 NBNO60934 754 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 RB1P06400 928 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 F7P08709 466 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 EPCAMP16422 314 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 TNFRSF8P28908 595 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 SLC1A5Q15758 541 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 ATP13A5Q4VNC0 1218 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 PITRM1Q5JRX3 1037 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 EOGTQ5NDL2 527 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 KIAA0930Q6ICG6 404 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 GPRIN1Q7Z2K8 1008 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 ZNF598Q86UK7 904 aaKnown RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 FAM129CQ86XR2 697 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 XAGE5Q8WWM1 108 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 SORCS1Q8WY21 1168 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 BRINP2Q9C0B6 783 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 COPG2Q9UBF2 871 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 GJD2Q9UKL4 321 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 MTF2Q9Y483 593 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 EDDM13A0A1B0GTR0 161 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 GRXCR1A8MXD5 290 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 GTPBP1O00178 669 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 SCN2BO60939 215 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 HSMCR30P0CW71 290 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 CMPK1P30085 196 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 RPL3P39023 403 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 ARRB1P49407 418 aaPredicted RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 TMED1Q13445 227 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 CLLU1OSQ5K130 101 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 CLEC6AQ6EIG7 209 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 TRIM40Q6P9F5 258 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 C16orf87Q6PH81 154 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 PAQR3Q6TCH7 311 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 RNF44Q7L0R7 432 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 UNC5BQ8IZJ1 945 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SRFBP1Q8NEF9 429 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 RDH11Q8TC12 318 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 P2RY13Q9BPV8 354 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SIKE1Q9BRV8 207 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 BTBD10Q9BSF8 475 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 PRRG3Q9BZD7 231 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 CD248Q9HCU0 757 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 EIF2B4Q9UI10 523 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 PPIEQ9UNP9 301 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 MAPRE3Q9UPY8 281 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 PLLPQ9Y342 182 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 PIPSLA2A3N6 862 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 NEMP2A6NFY4 417 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 C9JVG2 144 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 TRBC1P01850 177 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SLC35G6P0C7Q6 338 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 COL6A2P12110 1019 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 VAV1P15498 845 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 AQP1P29972 269 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SLC1A2P43004 574 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 WDR5P61964 334 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 LDLRAP1Q5SW96 308 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 DRICH1Q6PGQ1 229 aaPredicted RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 CHRDL2Q6WN34 429 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 R3HCC1LQ7Z5L2 792 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 FAM20CQ8IXL6 584 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 EID3Q8N140 333 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 FSTL5Q8N475 847 aaPredicted RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 LMO3Q8TAP4 145 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 METTL21AQ8WXB1 218 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SMARCD2Q92925 531 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 TMEM216Q9P0N5 145 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SLC17A6Q9P2U8 582 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 B4GALT6Q9UBX8 382 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 KCNK6Q9Y257 313 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 UPK3BL1B0FP48 263 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 UPK3BL2E5RIL1 263 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SIN3BO75182 1162 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 POP7O75817 140 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 RECQL5O94762 991 aaPredicted RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 GSNP06396 782 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 HNRNPA1P09651 372 aaKnown RBP eCLIP9.15□□□□□ -0.94
GGA3-223ENST00000621870 CTSAP10619 480 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 FCGR1AP12314 374 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 GNAZP19086 355 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 GRIA3P42263 894 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 HCAR3P49019 387 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 C2orf80Q0P641 193 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 GPR33Q49SQ1 333 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 CAPRIN2Q6IMN6 1127 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 TYW3Q6IPR3 259 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 TPRG1Q6ZUI0 275 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 SNX20Q7Z614 316 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 LRRTM3Q86VH5 581 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 GLIS1Q8NBF1 620 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 EXOSC8Q96B26 276 aaKnown RBP9.15□□□□□ -0.94
GGA3-223ENST00000621870 OTUB2Q96DC9 234 aa9.15□□□□□ -0.94
GGA3-223ENST00000621870 MTERF1Q99551 399 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms