RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ADAMTSL4Q6UY14 1074 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 ASB18Q6ZVZ8 466 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 TECPR1Q7Z6L1 1165 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 SLC9B2Q86UD5 537 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 PLXDC1Q8IUK5 500 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 TP53INP2Q8IXH6 220 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 CCDC13Q8IYE1 715 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 MCOLN2Q8IZK6 566 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 CBARPQ8N350 705 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 RNF10Q8N5U6 811 aaKnown RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 EXD1Q8NHP7 514 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 MCCC1Q96RQ3 725 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 PEBP4Q96S96 227 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 OSBPL9Q96SU4 736 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 AGPAT1Q99943 283 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 SARS2Q9NP81 518 aaKnown RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 PRDM8Q9NQV8 689 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 PARVAQ9NVD7 372 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 AIPL1Q9NZN9 384 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 CWC15Q9P013 229 aaKnown RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 VPS18Q9P253 973 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 PLEKHB1Q9UF11 243 aaPredicted RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 CNOT8Q9UFF9 292 aaKnown RBP7.75□□□□□ -1.17
CLK1-215ENST00000621181 TBC1D29Q9UFV1 150 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 NENFQ9UMX5 172 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 POLHQ9Y253 713 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 PRKAB1Q9Y478 270 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 UNC79Q9P2D8 2635 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 ESPL1Q14674 2120 aa7.75□□□□□ -1.17
CLK1-215ENST00000621181 TTLL8A6PVC2 850 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 TMCO5BA8MYB1 307 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 K7EM74 188 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 SNX2O60749 519 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 KATNA1O75449 491 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 RFPL1O75677 317 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 EML2O95834 649 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 DLGAP3O95886 979 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 CCDC172P0C7W6 258 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 ACP5P13686 325 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 SLC2A4P14672 509 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 ZNF30P17039 623 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 TCP1P17987 556 aaKnown RBP7.74□□□□□ -1.17
CLK1-215ENST00000621181 F8A1P23610 371 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 MIPP30301 263 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 MAGEA1P43355 309 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 MMP13P45452 471 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 ZNF135P52742 658 aaPredicted RBP7.74□□□□□ -1.17
CLK1-215ENST00000621181 EPHA4P54764 986 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 PRSS12P56730 875 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 C2orf54Q08AI8 447 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 DPYSQ14117 519 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 MARC1Q5VT66 337 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 HIST2H2BCQ6DN03 193 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 ACAD10Q6JQN1 1059 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 IYDQ6PHW0 289 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 RFLNAQ6ZTI6 216 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 PSTKQ8IV42 348 aaKnown RBP7.74□□□□□ -1.17
CLK1-215ENST00000621181 PGBD5Q8N414 524 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 ATPAF2Q8N5M1 289 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 SPATA4Q8NEY3 305 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 RNF31Q96EP0 1072 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 STAMBPL1Q96FJ0 436 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 HERPUD2Q9BSE4 406 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 ABCG8Q9H221 673 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 EPB41L1Q9H4G0 881 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 DMGDHQ9UI17 866 aaKnown RBP7.74□□□□□ -1.17
CLK1-215ENST00000621181 KCND3Q9UK17 655 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 CROTQ9UKG9 612 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 KCNK6Q9Y257 313 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 CACNA1DQ01668 2161 aa7.74□□□□□ -1.17
CLK1-215ENST00000621181 KIR2DS5A0A0G2JLQ3 304 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 A0A0G2JNG1 304 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 BHMG1C9JSJ3 638 aaPredicted RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 H3BRJ5 948 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 KIR2DS3K7RE56 304 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 SERPING1P05155 500 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 PDHA1P08559 390 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 F3P13726 295 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 ARL4AP40617 200 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 UQCRFS1P47985 274 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 HCAR3P49019 387 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 PTSQ03393 145 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 ITKQ08881 620 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 MAP7Q14244 749 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 KIR2DS5Q14953 304 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 ZSCAN26Q16670 478 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 SMTNL2Q2TAL5 461 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 RALGPS1Q5JS13 557 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 FHL5Q5TD97 284 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 CRYBG3Q68DQ2 2970 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 C6orf15Q6UXA7 325 aaPredicted RBP7.73□□□□□ -1.17
CLK1-215ENST00000621181 PHYKPLQ8IUZ5 450 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 RASGRP3Q8IV61 690 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLK1-215ENST00000621181 ARFGAP1Q8N6T3 406 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 AVL9Q8NBF6 648 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 PIH1D2Q8WWB5 315 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 SH3GL2Q99962 352 aa7.73□□□□□ -1.17
CLK1-215ENST00000621181 LRRC1Q9BTT6 524 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms