RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 EFTUD2Q15029 972 aaKnown RBP eCLIP13.48□□□□□ -0.25
NEK3-210ENST00000620675 PLA2G4EQ3MJ16 856 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 CRTC3Q6UUV7 619 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 C3orf62Q6ZUJ4 267 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 PARGQ86W56 976 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 PALM2Q8IXS6 379 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
NEK3-210ENST00000620675 SGSM3Q96HU1 749 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 NAT9Q9BTE0 207 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 TXLNGYQ9BZA5 131 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 FOXP3Q9BZS1 431 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 PHACTR1Q9C0D0 580 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 TMEM168Q9H0V1 697 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 FBXO6Q9NRD1 293 aaPredicted RBP13.48□□□□□ -0.25
NEK3-210ENST00000620675 UCKL1Q9NWZ5 548 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 MOCS1Q9NZB8 636 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
NEK3-210ENST00000620675 IGLV3-16A0A075B6K0 115 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 CDK14O94921 469 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 ACSL3O95573 720 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 TTC4O95801 387 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 PYGLP06737 847 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 PAMP19021 973 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 GPR33Q49SQ1 333 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 CILP2Q8IUL8 1156 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 GSDMBQ8TAX9 411 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 RUBCNQ92622 972 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 COPS8Q99627 209 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 NUSAP1Q9BXS6 441 aaKnown RBP13.47□□□□□ -0.25
NEK3-210ENST00000620675 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 EPB41L4BQ9H329 900 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 GAREM1Q9H706 876 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 CARS2Q9HA77 564 aaKnown RBP13.47□□□□□ -0.25
NEK3-210ENST00000620675 PPANQ9NQ55 473 aaKnown RBP13.47□□□□□ -0.25
NEK3-210ENST00000620675 ZDHHC3Q9NYG2 299 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 SLC23A2Q9UGH3 650 aa13.47□□□□□ -0.25
NEK3-210ENST00000620675 IQCF5A8MTL0 148 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 NUAK1O60285 661 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 S1PR4O95977 384 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 CSF2P04141 144 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 HTR1BP28222 390 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 HK3P52790 923 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 PGGT1BP53609 377 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 LDLRAP1Q5SW96 308 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 TEDDM1Q5T9Z0 273 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 ARMC3Q5W041 872 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 GATAD2AQ86YP4 633 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 SFTPA2Q8IWL1 248 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 MINDY1Q8N5J2 469 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 LKAAEAR1Q8TD35 194 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 ELF4Q99607 663 aaPredicted RBP13.46□□□□□ -0.25
NEK3-210ENST00000620675 LRRC61Q9BV99 259 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 VPS37BQ9H9H4 285 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 ZNHIT2Q9UHR6 403 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 CRYL1Q9Y2S2 319 aa13.46□□□□□ -0.25
NEK3-210ENST00000620675 CDX4O14627 284 aaPredicted RBP13.46□□□□□ -0.26
NEK3-210ENST00000620675 TOR1BO14657 336 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 HAUS5O94927 633 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 RASGRP1O95267 797 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 NME1P15531 152 aaKnown RBP13.46□□□□□ -0.26
NEK3-210ENST00000620675 JUNDP17535 347 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 AK4P27144 223 aaPredicted RBP13.46□□□□□ -0.26
NEK3-210ENST00000620675 PPARDQ03181 441 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 THOC5Q13769 683 aaKnown RBP13.46□□□□□ -0.26
NEK3-210ENST00000620675 PTK2BQ14289 1009 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 TYSND1Q2T9J0 566 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 PYCR3Q53H96 274 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 WDR93Q6P2C0 686 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 CNSTQ6PJW8 725 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 TMEM220Q6QAJ8 160 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 NAPRTQ6XQN6 538 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 C11orf96Q7Z7L8 435 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 CCNJLQ8IV13 435 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 PHACTR4Q8IZ21 702 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 LILRA3Q8N6C8 439 aaPredicted RBP13.46□□□□□ -0.26
NEK3-210ENST00000620675 GPR150Q8NGU9 434 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 FAM174AQ8TBP5 190 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 FBF1Q8TES7 1133 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 ULK4Q96C45 1275 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 SCARF2Q96GP6 870 aaPredicted RBP13.46□□□□□ -0.26
NEK3-210ENST00000620675 CLPBQ9H078 707 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 GULP1Q9UBP9 304 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 FAM8A1Q9UBU6 413 aa13.46□□□□□ -0.26
NEK3-210ENST00000620675 CHUKO15111 745 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 MSH3P20585 1137 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 DPP6P42658 865 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 CSRP2Q16527 193 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 ZNF423Q2M1K9 1284 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 XKR5Q6UX68 686 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
NEK3-210ENST00000620675 NRROSQ86YC3 692 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 DCP2Q8IU60 420 aaKnown RBP13.45□□□□□ -0.26
NEK3-210ENST00000620675 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 RELL1Q8IUW5 271 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 GPR161Q8N6U8 529 aaKnown RBP13.45□□□□□ -0.26
NEK3-210ENST00000620675 LPGAT1Q92604 370 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 FAM136AQ96C01 138 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 VPS18Q9P253 973 aa13.45□□□□□ -0.26
NEK3-210ENST00000620675 APOBEC3BQ9UH17 382 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms