RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 CDK15Q96Q40 435 aa9.13□□□□□ -0.95
RBFOX1-223ENST00000620507 TMEM175Q9BSA9 504 aa9.13□□□□□ -0.95
RBFOX1-223ENST00000620507 TSEN34Q9BSV6 310 aaKnown RBP9.13□□□□□ -0.95
RBFOX1-223ENST00000620507 PNPLA3Q9NST1 481 aa9.13□□□□□ -0.95
RBFOX1-223ENST00000620507 NUDT4Q9NZJ9 180 aa9.13□□□□□ -0.95
RBFOX1-223ENST00000620507 BLOC1S6Q9UL45 172 aa9.13□□□□□ -0.95
RBFOX1-223ENST00000620507 POLR3HQ9Y535 204 aaPredicted RBP9.13□□□□□ -0.95
RBFOX1-223ENST00000620507 ACTL7AQ9Y615 435 aa9.13□□□□□ -0.95
RBFOX1-223ENST00000620507 ANKRD12Q6UB98 2062 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 WDR81Q562E7 1941 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 A0A087WXM4 84 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 A6NHS1 94 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ESRRBO95718 433 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 CKMT2P17540 419 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ARNTP27540 789 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 POLR2LP62875 67 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 SH3BP2P78314 561 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 MS4A2Q01362 244 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 TNK2Q07912 1038 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 GALNT1Q10472 559 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 TRAF2Q12933 501 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 GTF2H3Q13889 308 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ARHGAP15Q53QZ3 475 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 MANEALQ5VSG8 457 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 LYPLAL1Q5VWZ2 237 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 GRAMD4Q6IC98 578 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 CBR4Q8N4T8 237 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 TOP1MTQ969P6 601 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 SPATA16Q9BXB7 569 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 UGT2B28Q9BY64 529 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ABCG8Q9H221 673 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 TNKS2Q9H2K2 1166 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 KIAA1522Q9P206 1035 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 CFAP97Q9P2B7 532 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 KIF17Q9P2E2 1029 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 INVSQ9Y283 1065 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 YIPF1Q9Y548 306 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 DNAJC15Q9Y5T4 150 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 TRIP12Q14669 1992 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 SHROOM3Q8TF72 1996 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 TRAV19A0A0A6YYK7 116 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ZNF840PA6NDX5 716 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 IQCF5A8MTL0 148 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ALPIP09923 528 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 PRSS56P0CW18 603 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 S100A3P33764 101 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ZNF284Q2VY69 593 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 B3GNT6Q6ZMB0 384 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 DET1Q7L5Y6 550 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 LYSMD3Q7Z3D4 306 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 METTL3Q86U44 580 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 SATL1Q86VE3 508 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 RALGPS2Q86X27 583 aaPredicted RBP9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ZDHHC13Q8IUH4 622 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 VPS37AQ8NEZ2 397 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 FBXO30Q8TB52 745 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 GRIN3AQ8TCU5 1115 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 PTERQ96BW5 349 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 LRRC58Q96CX6 371 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ELAC1Q9H777 363 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 SPG21Q9NZD8 308 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ZNF711Q9Y462 761 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 PTGDR2Q9Y5Y4 395 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 PARP14Q460N5 1801 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 hCG_2014768A0A024R1R8 64 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 LOC285095A0A1B0GVY8 99 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 DRGXA6NNA5 263 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ZNF195O14628 629 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 OR1I1O60431 355 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 MT-ND1P03886 318 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 PCNAP12004 261 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 CYP2A7P20853 494 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 CSKP41240 450 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 PPP3CCP48454 512 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 ERVK-8P63133 956 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 VAC14Q08AM6 782 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 GTF2H2Q13888 395 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 OR4D1Q15615 310 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 GTF2H2CQ6P1K8 395 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 RPL10LQ96L21 214 aaKnown RBP9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 GORASP1Q9BQQ3 440 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 CORO1BQ9BR76 489 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 GSTO2Q9H4Y5 243 aa9.12□□□□□ -0.95
RBFOX1-223ENST00000620507 CCDC189A1A4V9 331 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 CST5P28325 142 aaPredicted RBP9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 AGTR2P50052 363 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 DIO3P55073 304 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 TPGS2Q68CL5 300 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 CHST9Q7L1S5 443 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 BHLHA9Q7RTU4 235 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 TBC1D21Q8IYX1 336 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 FIBCD1Q8N539 461 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 CLDN19Q8N6F1 224 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 KLHDC9Q8NEP7 349 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 DTNBP1Q96EV8 351 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 TDRD1Q9BXT4 1180 aaKnown RBP9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 NOL6Q9H6R4 1146 aaKnown RBP9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 DOCK3Q8IZD9 2030 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 SLC28A1O00337 649 aa9.11□□□□□ -0.95
RBFOX1-223ENST00000620507 FKTNO75072 461 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms