RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 HACD2Q6Y1H2 254 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 PLD5Q8N7P1 536 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 VANGL1Q8TAA9 524 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 BLOC1S5Q8TDH9 187 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 DEDD2Q8WXF8 326 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 SIGLEC10Q96LC7 697 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 SAMD11Q96NU1 681 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 FTHL17Q9BXU8 183 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 UCK2Q9BZX2 261 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 TMEM168Q9H0V1 697 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 MIR1-1HGQ9H1L0 117 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 SLC6A17Q9H1V8 727 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 PPA2Q9H2U2 334 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 OR51B5Q9H339 312 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 POLR3BQ9NW08 1133 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 SLC17A6Q9P2U8 582 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 CPNE7Q9UBL6 633 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 OPTCQ9UBM4 332 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 TMPRSS11EQ9UL52 423 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 AURKCQ9UQB9 309 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 PDE10AQ9Y233 779 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 MAN2B2Q9Y2E5 1009 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 KCNU1A8MYU2 1149 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 NEMP1O14524 444 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 TPP1O14773 563 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 MED7O43513 233 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 PRKCBP05771 671 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 RETP07949 1114 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 UBA1P22314 1058 aaKnown RBP10.28□□□□□ -0.76
VPS11-207ENST00000620429 BCAR1P56945 870 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 SCRN3Q0VDG4 424 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 DBPQ10586 325 aaPredicted RBP10.28□□□□□ -0.76
VPS11-207ENST00000620429 TAF12Q16514 161 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 FAM102AQ5T9C2 384 aaPredicted RBP10.28□□□□□ -0.76
VPS11-207ENST00000620429 FAM45BPQ6NSW5 357 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 LBX2Q6XYB7 198 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 CYS1Q717R9 158 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 RAB43Q86YS6 212 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 SULF1Q8IWU6 871 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 PM20D2Q8IYS1 436 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 TCTE3Q8IZS6 198 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 TRPV3Q8NET8 790 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 SLC7A14Q8TBB6 771 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 FAM45AQ8TCE6 357 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 PPP1R13LQ8WUF5 828 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 FAR1Q8WVX9 515 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 HDAC10Q969S8 669 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 TNIP3Q96KP6 325 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 RNF157Q96PX1 679 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 PCYT2Q99447 389 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 ADPGKQ9BRR6 497 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 BDH2Q9BUT1 245 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 ZNF302Q9NR11 478 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 GPATCH2LQ9NWQ4 482 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 VTI1BQ9UEU0 232 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 USP22Q9UPT9 525 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 RAP2CQ9Y3L5 183 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 CACNG2Q9Y698 323 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 COMMD10Q9Y6G5 202 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 ADGRA2Q96PE1 1338 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 LCTP09848 1927 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 METTL15A6NJ78 407 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 SLCO1B7G3V0H7 640 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 PRPSAP2O60256 369 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 PTP4A3O75365 173 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 HMGCRP04035 888 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 STMN1P16949 149 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 DDCP20711 480 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 RPL9P32969 192 aaKnown RBP10.28□□□□□ -0.76
VPS11-207ENST00000620429 TEKQ02763 1124 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 UBE3AQ05086 875 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 SMAD1Q15797 465 aaKnown RBP10.28□□□□□ -0.76
VPS11-207ENST00000620429 DUOXA2Q1HG44 320 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 FAM214AQ32MH5 1076 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 XKR3Q5GH77 459 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 C6orf141Q5SZD1 244 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 ZBTB37Q5TC79 503 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 TAF2Q6P1X5 1199 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 SCYL2Q6P3W7 929 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 CASC4Q6P4E1 433 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 KIAA1324Q6UXG2 1013 aaKnown RBP10.28□□□□□ -0.76
VPS11-207ENST00000620429 NAPRTQ6XQN6 538 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 TAGAPQ8N103 731 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 PARP16Q8N5Y8 322 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 CCNYL1Q8N7R7 359 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 KLHL6Q8WZ60 621 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 ELMO2Q96JJ3 720 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 NODALQ96S42 347 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 REXO4Q9GZR2 422 aaKnown RBP10.28□□□□□ -0.76
VPS11-207ENST00000620429 DNAI2Q9GZS0 605 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 LHX5Q9H2C1 402 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 MCCC2Q9HCC0 563 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 RANGRFQ9HD47 186 aaPredicted RBP10.28□□□□□ -0.76
VPS11-207ENST00000620429 ITM2CQ9NQX7 267 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 FNIP2Q9P278 1114 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 FAM8A1Q9UBU6 413 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 ENOPH1Q9UHY7 261 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 CDYLQ9Y232 598 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 PCDHA11Q9Y5I1 949 aa10.28□□□□□ -0.76
VPS11-207ENST00000620429 MYO18AQ92614 2054 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms