RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 PTPN18Q99952 460 aa4.52□□□□□ -1.69
CHL1-216ENST00000620033 DCUN1D5Q9BTE7 237 aa4.52□□□□□ -1.69
CHL1-216ENST00000620033 TNFRSF19Q9NS68 423 aa4.52□□□□□ -1.69
CHL1-216ENST00000620033 ZDHHC3Q9NYG2 299 aa4.52□□□□□ -1.69
CHL1-216ENST00000620033 SH3D21A4FU49 640 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 DPPA5A6NC42 116 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SIN3BO75182 1162 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 PAGE1O75459 146 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 REM1O75628 298 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TCP1P17987 556 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 PAICSP22234 425 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 GLRA2P23416 452 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 DPP4P27487 766 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 VIPR1P32241 457 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 GNALP38405 381 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 RPL3P39023 403 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 SERPINB9P50453 376 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 IRF8Q02556 426 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SIGLEC14Q08ET2 396 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TUBB3Q13509 450 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 LSM12Q3MHD2 195 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 HYIQ5T013 277 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 ZNF572Q7Z3I7 529 aaPredicted RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 LNX2Q8N448 690 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SLC44A3Q8N4M1 653 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 C1orf54Q8WWF1 131 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TMCO6Q96DC7 493 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TPD52L3Q96J77 140 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 NTPCRQ9BSD7 190 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 MCMBPQ9BTE3 642 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 UBTD1Q9HAC8 227 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 RCOR1Q9UKL0 485 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 LHX6Q9UPM6 363 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 WASF3Q9UPY6 502 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SLC22A14Q9Y267 594 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SETBP1Q9Y6X0 1596 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 MON2Q7Z3U7 1717 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 ATP6AP2A0A1C7CYW4 349 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SERTM1A2A2V5 107 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 C2CD4DB7Z1M9 353 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SMAD7O15105 426 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 TBX1O43435 398 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SLC37A4O43826 429 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 ATP6AP2O75787 350 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SRPRAP08240 638 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 AHCYP23526 432 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 RAD52P43351 418 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SLC6A9P48067 706 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 FXR1P51114 621 aaKnown RBP eCLIP4.51□□□□□ -1.69
CHL1-216ENST00000620033 CACNA2D1P54289 1103 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 IRF9Q00978 393 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 HHEXQ03014 270 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 RBL2Q08999 1139 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 KEAP1Q14145 624 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TRIM71Q2Q1W2 868 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 DCST1Q5T197 706 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TMEM211Q6ICI0 200 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 MTERF4Q7Z6M4 381 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 PIAS4Q8N2W9 510 aaPredicted RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 OR1N1Q8NGS0 311 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 OR8K5Q8NH50 307 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 WNT8BQ93098 351 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 CHFRQ96EP1 664 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TOX2Q96NM4 488 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TRIM4Q9C037 500 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 CDH20Q9HBT6 801 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 MORF4L1Q9UBU8 362 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TRHDEQ9UKU6 1024 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 ATP8A1Q9Y2Q0 1164 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 FAM96BQ9Y3D0 163 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 A0A1W2PQU0 124 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 FARS2O95363 451 aaKnown RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 ECDO95905 644 aaPredicted RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 ICAM2P13598 275 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 CCNA2P20248 432 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 IL10P22301 178 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 CXCR1P25024 350 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 HSD3B2P26439 372 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 MPLP40238 635 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 ARSFP54793 590 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 VSX2P58304 361 aaPredicted RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 PERM1Q5SV97 790 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 PPP1R3BQ86XI6 285 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TDRPQ86YL5 185 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TMEM132CQ8N3T6 1108 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 ARL10Q8N8L6 244 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 CCDC126Q96EE4 140 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 ZBTB45Q96K62 511 aaPredicted RBP4.51□□□□□ -1.69
CHL1-216ENST00000620033 RIBC2Q9H4K1 309 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 IL1RL2Q9HB29 575 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TM7SF3Q9NS93 570 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 FAIMQ9NVQ4 179 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 NSG1A0A0A6YYJ2 146 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TRIM49BA6NDI0 452 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 ANKRD61A6NGH8 418 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 TSPAN6O43657 245 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 SUPT7LO94864 414 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 MAP3K6O95382 1288 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 LY86O95711 162 aa4.51□□□□□ -1.69
CHL1-216ENST00000620033 RAB36O95755 333 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms