RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 NCF1P14598 390 aaPredicted RBP18.83■□□□□ 0.61
PSPC1-206ENST00000619300 EZRP15311 586 aaKnown RBP18.83■□□□□ 0.61
PSPC1-206ENST00000619300 HK3P52790 923 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 LCP2Q13094 533 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 ARSIQ5FYB1 569 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 FAM78AQ5JUQ0 283 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 RFLNAQ6ZTI6 216 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 ULK2Q8IYT8 1036 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 PELI3Q8N2H9 469 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 NAT14Q8WUY8 206 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 FAM161BQ96MY7 647 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 ZBTB26Q9HCK0 441 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 L3MBTL1Q9Y468 752 aa18.83■□□□□ 0.61
PSPC1-206ENST00000619300 COPG1Q9Y678 874 aaKnown RBP18.83■□□□□ 0.61
PSPC1-206ENST00000619300 SNX2O60749 519 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 TRIM16O95361 564 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 ASLP04424 464 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 C1SP09871 688 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 CD1EP15812 388 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 ITGB6P18564 788 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 SPINT3P49223 89 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 KPNB1Q14974 876 aaKnown RBP18.83■□□□□ 0.6
PSPC1-206ENST00000619300 TCEAL5Q5H9L2 206 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 LRRC73Q5JTD7 316 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 WFIKKN2Q8TEU8 576 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 CLPTM1LQ96KA5 538 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 MARK4Q96L34 752 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 RNPEPL1Q9HAU8 725 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 ZDHHC3Q9NYG2 299 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 CD274Q9NZQ7 290 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 GBF1Q92538 1859 aa18.83■□□□□ 0.6
PSPC1-206ENST00000619300 A0A088AWK7 358 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 AZIN1O14977 448 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 PBX2P40425 430 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 NSG1P42857 185 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 RGS4P49798 205 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 AGTR2P50052 363 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 CUL3Q13618 768 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 CYLC2Q14093 348 aaPredicted RBP18.82■□□□□ 0.6
PSPC1-206ENST00000619300 TGFBIQ15582 683 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 ATP13A5Q4VNC0 1218 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 KHDC1Q4VXA5 237 aaKnown RBP18.82■□□□□ 0.6
PSPC1-206ENST00000619300 CYHR1Q6ZMK1 362 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 NPAS3Q8IXF0 933 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 LKAAEAR1Q8TD35 194 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 WDR60Q8WVS4 1066 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 SFXN1Q9H9B4 322 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 MRGBPQ9NV56 204 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 SLC27A6Q9Y2P4 619 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 DNAJC15Q9Y5T4 150 aa18.82■□□□□ 0.6
PSPC1-206ENST00000619300 PRRC2BQ5JSZ5 2229 aaKnown RBP18.82■□□□□ 0.6
PSPC1-206ENST00000619300 CYP2A6P11509 494 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-206ENST00000619300 ITGAXP20702 1163 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 DGKAP23743 735 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 ARHGEF7Q14155 803 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 HERC3Q15034 1050 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 FBXO48Q5FWF7 155 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 GPRC6AQ5T6X5 926 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 ADAMTSL2Q86TH1 951 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 C12orf40Q86WS4 652 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 SNX32Q86XE0 403 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 VN1R2Q8NFZ6 395 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 BPIFB1Q8TDL5 484 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 ZNF483Q8TF39 744 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-206ENST00000619300 C19orf60Q96EN9 201 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 ASB16Q96NS5 453 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 COPS8Q99627 209 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 SEMA4BQ9NPR2 832 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-206ENST00000619300 SPATS2LQ9NUQ6 558 aaKnown RBP18.81■□□□□ 0.6
PSPC1-206ENST00000619300 NUDT4Q9NZJ9 180 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 NKX1-2Q9UD57 310 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-206ENST00000619300 IL36AQ9UHA7 158 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 UBDO15205 165 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 TULP3O75386 442 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 GPC4O75487 556 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 LMNAP02545 664 aaKnown RBP18.81■□□□□ 0.6
PSPC1-206ENST00000619300 TIMP2P16035 220 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 ZNF30P17039 623 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 KCNC3Q14003 757 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 PPP1R3AQ16821 1122 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 KANK2Q63ZY3 851 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 LARP4Q71RC2 724 aaKnown RBP eCLIP18.81■□□□□ 0.6
PSPC1-206ENST00000619300 NET1Q7Z628 596 aaPredicted RBP18.81■□□□□ 0.6
PSPC1-206ENST00000619300 ZBTB2Q8N680 514 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 SMARCD2Q92925 531 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 ULK4Q96C45 1275 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 LRIG1Q96JA1 1093 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 MTG2Q9H4K7 406 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 LATS2Q9NRM7 1088 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 PKD2L2Q9NZM6 624 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 SLC7A8Q9UHI5 535 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 PCTPQ9UKL6 214 aa18.81■□□□□ 0.6
PSPC1-206ENST00000619300 TSPAN11A1L157 253 aa18.8■□□□□ 0.6
PSPC1-206ENST00000619300 CIB2O75838 187 aa18.8■□□□□ 0.6
PSPC1-206ENST00000619300 MLYCDO95822 493 aa18.8■□□□□ 0.6
PSPC1-206ENST00000619300 CTSLP07711 333 aa18.8■□□□□ 0.6
PSPC1-206ENST00000619300 ARSAP15289 507 aa18.8■□□□□ 0.6
PSPC1-206ENST00000619300 FSHRP23945 695 aa18.8■□□□□ 0.6
PSPC1-206ENST00000619300 VIPR1P32241 457 aa18.8■□□□□ 0.6
PSPC1-206ENST00000619300 FOXA1P55317 472 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms