RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CDC14AQ9UNH5 594 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SCML2Q9UQR0 700 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 A0A1B0GTW7 788 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM72CH0Y354 149 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF701M0R085 212 aaPredicted RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 DEAF1O75398 565 aaPredicted RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 TSPAN8P19075 237 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 JAK1P23458 1154 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 DNAJB1P25685 340 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 CXCR3P49682 368 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 NUMBP49757 651 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 TAS2R39P59534 338 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 BNIP3Q12983 259 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SPIDRQ14159 915 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 PAFAH1B3Q15102 231 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM72AQ5TYM5 149 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 OTUD1Q5VV17 481 aaPredicted RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 BROXQ5VW32 411 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM72DQ6L9T8 149 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 CLEC14AQ86T13 490 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM72BQ86X60 149 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 TICAM1Q8IUC6 712 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 KDM1BQ8NB78 822 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF461Q8TAF7 563 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 ISL2Q96A47 359 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 VWCEQ96DN2 955 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 CLSTN3Q9BQT9 956 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 MTIF3Q9H2K0 278 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 RAD21L1Q9H4I0 556 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 AFF4Q9UHB7 1163 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 INSL6Q9Y581 213 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 PDCD11Q14690 1871 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 MYO7AQ13402 2215 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC38A8A6NNN8 435 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SOCS2O14508 198 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 IRAK2O43187 625 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 TLR5O60602 858 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 FGF18O76093 207 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 GJB5O95377 273 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 CXCL14O95715 111 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 AHSGP02765 367 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 PRKCGP05129 697 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC35E2BP0CK96 405 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 HDCP19113 662 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 CAPGP40121 348 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 DPP6P42658 865 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 MAGEA12P43365 314 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 RPS9P46781 194 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 SERPINB10P48595 397 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 PGGT1BP53609 377 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 PLCL1Q15111 1095 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 NCCRP1Q6ZVX7 275 aaPredicted RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 C2orf15Q8WU43 125 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 NTAN1Q96AB6 310 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 OLAHQ9NV23 265 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 EVLQ9UI08 416 aaPredicted RBP6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 OAZ3Q9UMX2 235 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 BACE2Q9Y5Z0 518 aa6.94□□□□□ -1.3
SRGAP3-213ENST00000618999 M0R3G1 203 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 EI24O14681 340 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 FOXD2O60548 495 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 PAGE1O75459 146 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 E2F6O75461 281 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 LRIG2O94898 1065 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 JUNP05412 331 aaKnown RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 GPIP06744 558 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 BMP2P12643 396 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 PLD1Q13393 1074 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CLEC6AQ6EIG7 209 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC8B1Q6J4K2 584 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 GALNT18Q6P9A2 607 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 BHLHA9Q7RTU4 235 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ETFBKMTQ8IXQ9 262 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TXNDC5Q8NBS9 432 aaKnown RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 OR9I1Q8NGQ6 314 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 PNPT1Q8TCS8 783 aaKnown RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 C19orf60Q96EN9 201 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 FCRL2Q96LA5 508 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 RNF145Q96MT1 663 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 VN1R3Q9BXE9 311 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 ALG9Q9H6U8 611 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 HMG20AQ9NP66 347 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 MID1IP1Q9NPA3 183 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 SMOXQ9NWM0 555 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 OSER1Q9NX31 292 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TRPM5Q9NZQ8 1165 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CEP290O15078 2479 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 SLC2A3P11169 496 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CTNNB1P35222 781 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CLCN5P51795 746 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 AIF1P55008 147 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TNK2Q07912 1038 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CAPRIN1Q14444 709 aaKnown RBP6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 MOGQ16653 247 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 VPS26BQ4G0F5 336 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 FAM45BPQ6NSW5 357 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 Q6ZNX1 250 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 C16orf59Q7L2K0 433 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 TBC1D21Q8IYX1 336 aa6.93□□□□□ -1.3
SRGAP3-213ENST00000618999 CLYBLQ8N0X4 340 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms