RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 LGALS13Q9UHV8 139 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 CD84Q9UIB8 345 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 KLF15Q9UIH9 416 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ANAPC5Q9UJX4 755 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 TMPRSS11EQ9UL52 423 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 CNOT6Q9ULM6 557 aaKnown RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SHOC2Q9UQ13 582 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ARL2BPQ9Y2Y0 163 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SNX24Q9Y343 169 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF711Q9Y462 761 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SNX11Q9Y5W9 270 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 DGKBQ9Y6T7 804 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 URB1O60287 2271 aaKnown RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 AHCTF1Q8WYP5 2266 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ARHGEF17Q96PE2 2063 aaPredicted RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SCN8AQ9UQD0 1980 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 TMEM131Q92545 1883 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 C1orf232A0A0U1RR37 186 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 LMO7DNF2Z398 122 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CCL22O00626 93 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 GAPDHSO14556 408 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 GPR39O43194 453 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 TMEM63AO94886 807 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 LDOC1O95751 146 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 FUCA1P04066 466 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ELFN1P0C7U0 828 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 THEGLP0DJG4 465 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CYP2A6P11509 494 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CKMT1AP12532 417 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 NME1P15531 152 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CHN1P15882 459 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 PNLIPP16233 465 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 BPIP17213 487 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CKMT2P17540 419 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CCND1P24385 295 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ACP1P24666 158 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 EPHA8P29322 1005 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 PHBP35232 272 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ADCY8P40145 1251 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 MAGEA6P43360 314 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 RPL21P46778 160 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SPINT3P49223 89 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 THOP1P52888 689 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SEC24CP53992 1094 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 GEMP55040 296 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 PFN3P60673 137 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SIM1P81133 766 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 EIF2B5Q13144 721 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 FZD2Q14332 565 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 KCNJ11Q14654 390 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 MORF4L2Q15014 288 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SETDB1Q15047 1291 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ACOX1Q15067 660 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ELOCQ15369 112 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SMAD1Q15797 465 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 UAP1L1Q3KQV9 507 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 KHDC1Q4VXA5 237 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 N4BP2L1Q5TBK1 243 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ARMC3Q5W041 872 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ESRP1Q6NXG1 681 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ZCCHC8Q6NZY4 707 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ZDHHC24Q6UX98 284 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 MACC1Q6ZN28 852 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 TMPRSS7Q7RTY8 843 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 APLFQ8IW19 511 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 PARP9Q8IXQ6 854 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 PNPLA1Q8N8W4 532 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 KDF1Q8NAX2 398 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 GPR26Q8NDV2 337 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 OR52K1Q8NGK4 314 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SETD7Q8WTS6 366 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 DYDC1Q8WWB3 177 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CKAP2Q8WWK9 683 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CPT1BQ92523 772 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 NAT6Q93015 286 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CCDC97Q96F63 343 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 MAGEB18Q96M61 343 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 RAB3IPQ96QF0 476 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 TBL1YQ9BQ87 522 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 TRIM51Q9BSJ1 452 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 RIOK2Q9BVS4 552 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 LGR4Q9BXB1 951 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SLC13A1Q9BZW2 595 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 DPH5Q9H2P9 285 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 TCEAL2Q9H3H9 227 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 TRABDQ9H4I3 376 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ARNT2Q9HBZ2 717 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 MAGEE1Q9HCI5 957 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 BPIFA1Q9NP55 256 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 CASS4Q9NQ75 786 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 GRHL1Q9NZI5 618 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 PAK5Q9P286 719 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SPASTQ9UBP0 616 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 FTSJ1Q9UET6 329 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 SLC24A2Q9UI40 661 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 WASF3Q9UPY6 502 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 FNDC3AQ9Y2H6 1198 aaKnown RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 OR1A2Q9Y585 309 aa5.21□□□□□ -1.58
SHMT1-211ENST00000618902 PCYT1BQ9Y5K3 369 aaPredicted RBP5.21□□□□□ -1.58
SHMT1-211ENST00000618902 ARL5AQ9Y689 179 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms