RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 ARHGAP24Q8N264 748 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 SREK1Q8WXA9 508 aaKnown RBP20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 CDH19Q9H159 772 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 TMEM245Q9H330 911 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 FBRSL1Q9HCM7 1045 aaKnown RBP20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 TNFRSF12AQ9NP84 129 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 NCKIPSDQ9NZQ3 722 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 CRLS1Q9UJA2 301 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 A0A1W2PQ67 120 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 UBXN8O00124 270 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 PFDN6O15212 129 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 HNRNPLP14866 589 aaKnown RBP eCLIP20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 PSMC3P17980 439 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ITGB6P18564 788 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 IDH3AP50213 366 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 B4GALNT1Q00973 533 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 TSNQ15631 228 aaKnown RBP20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ZRSR2Q15696 482 aaKnown RBP20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 HNRNPA1L2Q32P51 320 aaKnown RBP20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 EP400NLQ6ZTU2 488 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 SCAMP4Q969E2 229 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 MCUR1Q96AQ8 359 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ACOX2Q99424 681 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 SYTL2Q9HCH5 934 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ARMCX1Q9P291 453 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ITM2BQ9Y287 266 aa20.41■□□□□ 0.86
CNTNAP3B-212ENST00000617422 LRRC14BA6NHZ5 514 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 H0Y3Z8 333 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 FCHO1O14526 889 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 SPINT1O43278 529 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 VIPR1P32241 457 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 VHLP40337 213 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 CCDC6Q16204 474 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 RBFAQ8N0V3 343 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 CPA6Q8N4T0 437 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 KIAA1191Q96A73 305 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 CLPBQ9H078 707 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 WWP1Q9H0M0 922 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 TFB2MQ9H5Q4 396 aaKnown RBP20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 DKK3Q9UBP4 350 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 TRMT6Q9UJA5 497 aaKnown RBP20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 RAP2CQ9Y3L5 183 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 PLXNA2O75051 1894 aa20.4■□□□□ 0.86
CNTNAP3B-212ENST00000617422 NPEPPSL1A6NEC2 478 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 TMEM233B4DJY2 109 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ARNTLO00327 626 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 PLK4O00444 970 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 PYGLP06737 847 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ESRRAP11474 423 aaPredicted RBP20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ZNF7P17097 686 aaPredicted RBP20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 RPS3P23396 243 aaKnown RBP eCLIP20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 GDI1P31150 447 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 GRIN2CQ14957 1233 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 MUM1Q2TAK8 710 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 GPR33Q49SQ1 333 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ANO7Q6IWH7 933 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 CES5AQ6NT32 575 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 Q6ZVL8 140 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 RHEBL1Q8TAI7 183 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 PLEKHG4BQ96PX9 1271 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 ILKAPQ9H0C8 392 aaPredicted RBP20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 COG4Q9H9E3 785 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 CLDND1Q9NY35 253 aa20.39■□□□□ 0.86
CNTNAP3B-212ENST00000617422 TBC1D3BA6NDS4 549 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 E5RI56 91 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 KPNA3O00505 521 aaPredicted RBP20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 JUNP05412 331 aaKnown RBP20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ETV3P41162 512 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SOX9P48436 509 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 EIF4HQ15056 248 aaKnown RBP20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 KHDC1Q4VXA5 237 aaKnown RBP20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PIWIL4Q7Z3Z4 852 aaKnown RBP20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ELSPBP1Q96BH3 223 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 LINGO1Q96FE5 620 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 LRIG1Q96JA1 1093 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 FAM129BQ96TA1 746 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PCDHB1Q9Y5F3 818 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 COMMD10Q9Y6G5 202 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 LRRK1Q38SD2 2015 aa20.39■□□□□ 0.85
CNTNAP3B-212ENST00000617422 NVLO15381 856 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 GRID2O43424 1007 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 NPHS1O60500 1241 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SIX3O95343 332 aaPredicted RBP20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 IL12RB1P42701 662 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PTPN5P54829 565 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ARHGEF7Q14155 803 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 SLC9B1Q4ZJI4 515 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PTRHD1Q6GMV3 140 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 YAF2Q8IY57 180 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 FUBP1Q96AE4 644 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ARRDC3Q96B67 414 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 GSTO2Q9H4Y5 243 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TSR3Q9UJK0 312 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 PPM1HQ9ULR3 514 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 DHRS7Q9Y394 339 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 MATN2O00339 956 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 ECI2O75521 394 aa20.38■□□□□ 0.85
CNTNAP3B-212ENST00000617422 TSPAN8P19075 237 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms