RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RPL22P35268 128 aaKnown RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 UBE2NP61088 152 aaKnown RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 RBFAQ8N0V3 343 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 BPIFB6Q8NFQ5 453 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 GPR152Q8TDT2 470 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 MEAF6Q9HAF1 191 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 POLR3BQ9NW08 1133 aaPredicted RBP12.56□□□□□ -0.4
TCF4-248ENST00000616053 TSPAN4O14817 238 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 PRKAA2P54646 552 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 HERV-K104P61576 105 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 DEFB106AQ8N104 65 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 GPR151Q8TDV0 419 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 SHC3Q92529 594 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 ART5Q96L15 291 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 CEP295NLQ96MC4 621 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 OSBPL11Q9BXB4 747 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 DLGAP2Q9P1A6 1054 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 GNG13Q9P2W3 67 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 FTSJ1Q9UET6 329 aa12.56□□□□□ -0.4
TCF4-248ENST00000616053 TSPOAP1O95153 1857 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 KCNK1O00180 336 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 RFXANKO14593 260 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 RRP8O43159 456 aaKnown RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 GLSO94925 669 aaPredicted RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 CD53P19397 219 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 CD52P31358 61 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 HYAL2Q12891 473 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 NAB2Q15742 525 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 CES3Q6UWW8 571 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 MRPL41Q8IXM3 137 aaKnown RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 HTR3CQ8WXA8 447 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 SLC39A3Q9BRY0 314 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 PCDH18Q9HCL0 1135 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 SLAMF7Q9NQ25 335 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 CSN2P05814 226 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 ZCCHC18P0CG32 403 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 CNTN2Q02246 1040 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 HMBOX1Q6NT76 420 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 C8orf59Q8N0T1 100 aaPredicted RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 SPAG16Q8N0X2 631 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 ZNF610Q8N9Z0 462 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 POF1BQ8WVV4 589 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 CAPNS2Q96L46 248 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 ULBP1Q9BZM6 244 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 PCDHB16Q9NRJ7 776 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 ARL8BQ9NVJ2 186 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 SCDO00767 359 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 EPHB6O15197 1021 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 C9P02748 559 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 UGT2B4P06133 528 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 ELNP15502 786 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 COILP38432 576 aaPredicted RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 SF3B4Q15427 424 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■■■ 28.8
TCF4-248ENST00000616053 AADATQ8N5Z0 425 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 PGAM1P18669 254 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 RPS3AP61247 264 aaKnown RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 ITPK1Q13572 414 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 DNASE1L3Q13609 305 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 ABHD13Q7L211 337 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 FUBP3Q96I24 572 aaKnown RBP eCLIP12.55□□□□□ -0.4
TCF4-248ENST00000616053 ZSCAN5BA6NJL1 495 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 PCDHGA12O60330 932 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 PAPSS2O95340 614 aaPredicted RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 VNN2O95498 520 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 PDHBP11177 359 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 KBTBD2Q8IY47 623 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 OR6K6Q8NGW6 343 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 EZH1Q92800 747 aaPredicted RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 TRMT61BQ9BVS5 477 aaKnown RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 TLR5O60602 858 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 OTCP00480 354 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 HCKP08631 526 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 ARCN1P48444 511 aaKnown RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 CCZ1BP86790 482 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 CCZ1P86791 482 aaPredicted RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 GAD2Q05329 585 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 RBMS3Q6XE24 437 aaKnown RBP12.55□□□□□ -0.4
TCF4-248ENST00000616053 GPR180Q86V85 440 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 ZNF366Q8N895 744 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 TCF7L1Q9HCS4 588 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 HPSEQ9Y251 543 aa12.55□□□□□ -0.4
TCF4-248ENST00000616053 SUV39H1O43463 412 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 HGFP14210 728 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 IL18Q14116 193 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 FGL2Q14314 439 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 CPTPQ5TA50 214 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 SMARCD3Q6STE5 483 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 LANCL3Q6ZV70 420 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 C10orf107Q8IVU9 208 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 TDRD1Q9BXT4 1180 aaKnown RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 PLEKHA3Q9HB20 300 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 PDPK1O15530 556 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 CD247P20963 164 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 LPOP22079 712 aaPredicted RBP12.54□□□□□ -0.4
TCF4-248ENST00000616053 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
TCF4-248ENST00000616053 ARHGAP36Q6ZRI8 547 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms