RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 COMMD1Q8N668 190 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 NR4A3Q92570 626 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 SLC35C1Q96A29 364 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 TWNKQ96RR1 684 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 TBC1D10AQ9BXI6 508 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 CXorf21Q9HAI6 301 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 TMX2Q9Y320 296 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 DCDC2BA2VCK2 349 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 DDX3XO00571 662 aaKnown RBP eCLIP9.21□□□□□ -0.93
COL12A1-211ENST00000615798 HNF1AP20823 631 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 CMPK1P30085 196 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 AVPR1AP37288 418 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 AFF2P51816 1311 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 NAPRTQ6XQN6 538 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 ZSWIM3Q96MP5 696 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 SPON2Q9BUD6 331 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF416Q9BWM5 594 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 NT5C1AQ9BXI3 368 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 CATSPERBQ9H7T0 1116 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 DMGDHQ9UI17 866 aaKnown RBP9.21□□□□□ -0.93
COL12A1-211ENST00000615798 ZNRF3Q9ULT6 936 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 TTLL8A6PVC2 850 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 FBP2O00757 339 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 LCMT2O60294 686 aaKnown RBP9.21□□□□□ -0.93
COL12A1-211ENST00000615798 TOX4O94842 621 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 RTP1P59025 263 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 ZBTB33Q86T24 672 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 FAM83AQ86UY5 434 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 HERC6Q8IVU3 1022 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 OR4C5Q8NGB2 326 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 ACE2Q9BYF1 805 aaPredicted RBP9.21□□□□□ -0.93
COL12A1-211ENST00000615798 MTF2Q9Y483 593 aaPredicted RBP9.21□□□□□ -0.93
COL12A1-211ENST00000615798 ANXA9O76027 345 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 F9P00740 461 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 CHAF1BQ13112 559 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 SWSAP1Q6NVH7 229 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 ISLR2Q6UXK2 745 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 ADGRD2Q7Z7M1 963 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 C9orf43Q8TAL5 461 aaPredicted RBP9.21□□□□□ -0.93
COL12A1-211ENST00000615798 SGIP1Q9BQI5 828 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 HIPK2Q9H2X6 1198 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 CFL2Q9Y281 166 aa9.21□□□□□ -0.93
COL12A1-211ENST00000615798 SLC37A4O43826 429 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 OOSP2Q86WS3 158 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 FAM126BQ8IXS8 530 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 FAM47BQ8NA70 645 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 IPMKQ8NFU5 416 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 BTBD9Q96Q07 612 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 LRRC4BQ9NT99 713 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 CLEC3BP05452 202 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 RNF4P78317 190 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 GALEQ14376 348 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 EZH2Q15910 746 aaKnown RBP9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ZPBP2Q6X784 338 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 SLC26A11Q86WA9 606 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 TICAM1Q8IUC6 712 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ANKFN1Q8N957 763 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 FNDC5Q8NAU1 212 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 TSEN15Q8WW01 171 aaKnown RBP9.21□□□□□ -0.94
COL12A1-211ENST00000615798 GPER1Q99527 375 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 GPR63Q9BZJ6 419 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 BTN3A1O00481 513 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 MYBP10242 640 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ANXA3P12429 323 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 NAT1P18440 290 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 CRABP2P29373 138 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 S100A3P33764 101 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 NR2C2P49116 596 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ZNF792Q3KQV3 632 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 COLEC12Q5KU26 742 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ILDR2Q71H61 639 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 NT5DC3Q86UY8 548 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 SNX33Q8WV41 574 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 FCRL4Q96PJ5 515 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 PAFAH2Q99487 392 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ESPL1Q14674 2120 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 TRAPPC13A5PLN9 417 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 CD9P21926 228 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 WDR72Q3MJ13 1102 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 HS6ST3Q8IZP7 471 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 DNERQ8NFT8 737 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ZDHHC12Q96GR4 267 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 SULT4A1Q9BR01 284 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 TPK1Q9H3S4 243 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 SENP2Q9HC62 589 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ASCC3Q8N3C0 2202 aaKnown RBP9.21□□□□□ -0.94
COL12A1-211ENST00000615798 LGR5O75473 907 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 RBP3P10745 1247 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ORC1Q13415 861 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 PRKD1Q15139 912 aaPredicted RBP9.21□□□□□ -0.94
COL12A1-211ENST00000615798 CBWD6Q4V339 395 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 CBWD3Q5JTY5 395 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 CBWD5Q5RIA9 395 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 CDC42EP5Q6NZY7 148 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 FAM198BQ6UWH4 519 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 CATSPER4Q7RTX7 472 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
COL12A1-211ENST00000615798 QTRT2Q9H974 415 aaKnown RBP9.21□□□□□ -0.94
COL12A1-211ENST00000615798 RPL26P61254 145 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms