RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 ANGPTL6Q8NI99 470 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 NCLNQ969V3 563 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM149B1Q96BN6 582 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 C19orf60Q96EN9 201 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 FYTTD1Q96QD9 318 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 TEX13BQ9BXU2 312 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 R3HDMLQ9H3Y0 253 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 PRDM12Q9H4Q4 367 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLA2Q9H6Q3 261 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 RANGRFQ9HD47 186 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 RASSF1Q9NS23 344 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 DNMT3LQ9UJW3 386 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 INVSQ9Y283 1065 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 CDK5RAP2Q96SN8 1893 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 LOC100130705A0A1B0GUX0 176 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 NPHS1O60500 1241 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 TNFRSF21O75509 655 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 CYP2C18P33260 490 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLC15A1P46059 708 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 NR2C2P49116 596 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 EMC2Q15006 297 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 CENPLQ8N0S6 344 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 PARP16Q8N5Y8 322 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 CSPG4P5Q96PW8 444 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 TNKS2Q9H2K2 1166 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 MMP27Q9H306 513 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 RHOJQ9H4E5 214 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 LRRC4Q9HBW1 653 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 NUFIP1Q9UHK0 495 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 VPS4AQ9UN37 437 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 BBIP1A8MTZ0 92 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 E5RI56 91 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 CYBBP04839 570 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 ALPLP05186 524 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 UMPSP11172 480 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 POLR2CP19387 275 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 CLDN10P78369 228 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 MADCAM1Q13477 382 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 POU6F1Q14863 301 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 NRARPQ7Z6K4 114 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 RBM23Q86U06 439 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF567Q8N184 647 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 MRPL57Q9BQC6 102 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 B3GNT5Q9BYG0 378 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLIRPQ9GZT3 109 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 OSBPL2Q9H1P3 480 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 ACAD9Q9H845 621 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 POLR3BQ9NW08 1133 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 C3orf18Q9UK00 162 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 INTS6Q9UL03 887 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 NRXN2Q9P2S2 1712 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 BCKDKO14874 412 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 MFSD11O43934 449 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 SERPINI2O75830 405 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 MT-ND2P03891 347 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 LINC00032P0C843 101 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 HSMCR30P0CW71 290 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 PSKH1P11801 424 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 BRMS1LQ5PSV4 323 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 MAP1SQ66K74 1059 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 DPY19L3Q6ZPD9 716 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 AHSA2Q719I0 299 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 NOXA1Q86UR1 476 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZC3HC1Q86WB0 502 aaKnown RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 WDR49Q8IV35 697 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 BRSK1Q8TDC3 778 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 FRS2Q8WU20 508 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 AURKBQ96GD4 344 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 BTN2A3PQ96KV6 586 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 TBCBQ99426 244 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 CDHR5Q9HBB8 845 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 PCDHGB6Q9Y5F9 930 aa10.29□□□□□ -0.76
TNFAIP3-208ENST00000615468 AHSGP02765 367 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 LCKP06239 509 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 MSH3P20585 1137 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 CD68P34810 354 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 ACAP2Q15057 778 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 PON2Q15165 354 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 HACD2Q6Y1H2 254 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 CEP97Q8IW35 865 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 GIPC2Q8TF65 315 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 TMEM176AQ96HP8 235 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 C3orf30Q96M34 536 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 PPM1MQ96MI6 270 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 MID1IP1Q9NPA3 183 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 PNMA8CA0A1B0GUJ8 204 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 TTC24A2A3L6 582 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 PRMT5O14744 637 aaPredicted RBP10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 HAT1O14929 419 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 IPO13O94829 963 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 ALDOCP09972 364 aaKnown RBP10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 KCNA5P22460 613 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 MAPK12P53778 367 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 OR4D2P58180 307 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 TAS2R39P59534 338 aa10.28□□□□□ -0.76
TNFAIP3-208ENST00000615468 SULT1C3Q6IMI6 304 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms