RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 SACM1LQ9NTJ5 587 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 UFSP2Q9NUQ7 469 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PARVAQ9NVD7 372 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 FBXO28Q9NVF7 368 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 C14orf119Q9NWQ9 140 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DNMT3BQ9UBC3 853 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 APOBEC3BQ9UH17 382 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 FOXD3Q9UJU5 478 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CAPN11Q9UMQ6 739 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ADAMTS5Q9UNA0 930 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 AKT3Q9Y243 479 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 BTBD3Q9Y2F9 522 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 WBP11Q9Y2W2 641 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PUS1Q9Y606 427 aaKnown RBP eCLIP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CPQQ9Y646 472 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CEPT1Q9Y6K0 416 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 FPGT-TNNI3KV9GXZ4 949 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 LRRC7Q96NW7 1537 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 TONSLQ96HA7 1378 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CCDC141Q6ZP82 1450 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 LTBP4Q8N2S1 1624 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 A0A1W2PQU0 124 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 DENND3A2RUS2 1198 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 A4D1N5 150 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 OR6C70A6NIJ9 312 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 KCNJ18B7U540 433 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ZNF701M0R085 212 aaPredicted RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 MEIS1O00470 390 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 MSI1O43347 362 aaKnown RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CCNT2O60583 730 aaKnown RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 JAK2O60674 1132 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 TRIM3O75382 744 aaPredicted RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 RHBDL1O75783 438 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 FAM155BO75949 473 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 RHOBTB1O94844 696 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 PGLSO95336 258 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 RAB3DO95716 219 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ONECUT2O95948 504 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 SERPINA5P05154 406 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 TPOP07202 933 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 GSTP1P09211 210 aaKnown RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CD48P09326 243 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 GNAO1P09471 354 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CSF1P09603 554 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CD3GP09693 182 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ERVK-10P10266 1014 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 TSHRP16473 764 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CYP2A7P20853 494 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 AHCYP23526 432 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 PTGER3P43115 390 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 MAGEA1P43355 309 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 DNM2P50570 870 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 MECP2P51608 486 aaKnown RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ZNF143P52747 638 aaPredicted RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 NDST2P52849 883 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 TPTEP56180 551 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 BCAR1P56945 870 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CABP4P57796 275 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ALDH6A1Q02252 535 aaKnown RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 GRIN1Q05586 938 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 SCN1BQ07699 218 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 MGAT3Q09327 533 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 TEFQ10587 303 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 NOGQ13253 232 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CAPSQ13938 189 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 LRRC32Q14392 662 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 KCNJ12Q14500 433 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 PDK1Q15118 436 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CDK10Q15131 360 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 PNLIPRP3Q17RR3 467 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 SLC5A12Q1EHB4 618 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 FAM83EQ2M2I3 478 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 PRAMEF20Q5VT98 475 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ANKRD40Q6AI12 368 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 SLC9A4Q6AI14 798 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 MTFR2Q6P444 385 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 GALNT18Q6P9A2 607 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 TMEM65Q6PI78 240 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 USP17L6PQ6QN14 398 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 KIAA1324Q6UXG2 1013 aaKnown RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 DENND5BQ6ZUT9 1274 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 HDDC2Q7Z4H3 204 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 DDX53Q86TM3 631 aaKnown RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ZNF410Q86VK4 478 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 GID4Q8IVV7 300 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ENTHD1Q8IYW4 607 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ZNF679Q8IYX0 411 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CYP4Z2PQ8N1L4 340 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 AGGF1Q8N302 714 aaeCLIP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 POU5F2Q8N7G0 328 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 MCUQ8NE86 351 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 OR5H6Q8NGV6 325 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 OR8K5Q8NH50 307 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 SETD6Q8TBK2 473 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CAPSLQ8WWF8 208 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 DPF1Q92782 380 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 SYTL4Q96C24 671 aaPredicted RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 APIPQ96GX9 242 aa3.01□□□□□ -1.93
CBWD3-209ENST00000614377 CCNL2Q96S94 520 aaPredicted RBP3.01□□□□□ -1.93
CBWD3-209ENST00000614377 ZBTB18Q99592 522 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms