RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 SNAPC1Q16533 368 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 ALG11Q2TAA5 492 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 LSM12Q3MHD2 195 aaKnown RBP6.83□□□□□ -1.32
CLCN3-211ENST00000613795 APOBEC3HQ6NTF7 200 aaKnown RBP6.83□□□□□ -1.32
CLCN3-211ENST00000613795 TMEM214Q6NUQ4 689 aaKnown RBP6.83□□□□□ -1.32
CLCN3-211ENST00000613795 SLC30A10Q6XR72 485 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 PLEKHG7Q6ZR37 379 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 LAPTM4BQ86VI4 370 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 SHC3Q92529 594 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 USP7Q93009 1102 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 VMP1Q96GC9 406 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 OSMRQ99650 979 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 SH2D3AQ9BRG2 576 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 SLC30A2Q9BRI3 323 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 AIFM2Q9BRQ8 373 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 COPS4Q9BT78 406 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 SYNDIG1Q9H7V2 258 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 SEMA4BQ9NPR2 832 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-211ENST00000613795 MRPL17Q9NRX2 175 aaKnown RBP6.83□□□□□ -1.32
CLCN3-211ENST00000613795 OPTCQ9UBM4 332 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 NFS1Q9Y697 457 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 KANTRA0A1W2PQU2 76 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 C1QTNF3-AMACRE9PGA6 284 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 CBX4O00257 560 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 NPHS1O60500 1241 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 PLIN3O60664 434 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 ATP5C1P36542 298 aaKnown RBP6.83□□□□□ -1.32
CLCN3-211ENST00000613795 RAB5BP61020 215 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 SIM2Q14190 667 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-211ENST00000613795 TIGD2Q4W5G0 525 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 RNASEH2BQ5TBB1 312 aaKnown RBP6.83□□□□□ -1.32
CLCN3-211ENST00000613795 DCLRE1AQ6PJP8 1040 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 CES3Q6UWW8 571 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 GPRIN3Q6ZVF9 776 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 VSIG10LQ86VR7 867 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 MIB1Q86YT6 1006 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 DNAJB3Q8WWF6 145 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 CD101Q93033 1021 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 HDAC10Q969S8 669 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 RDH12Q96NR8 316 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 RNF157Q96PX1 679 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 CNPPD1Q9BV87 410 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 SETD4Q9NVD3 440 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 ZNF112Q9UJU3 913 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 TMEM59LQ9UK28 342 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 TBC1D24Q9ULP9 559 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 B3GNT3Q9Y2A9 372 aa6.83□□□□□ -1.32
CLCN3-211ENST00000613795 ELOVL7A1L3X0 281 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 FAM149AA5PLN7 773 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 BTN3A1O00481 513 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 EI24O14681 340 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 NUAK1O60285 661 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 TRUB2O95900 331 aaKnown RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 CYP11A1P05108 521 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 PTPRAP18433 802 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 GRM5P41594 1212 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 TTPAP49638 278 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 GDI2P50395 445 aaKnown RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 LY6KQ17RY6 165 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 ALFQ53S48 1182 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 STXBP5Q5T5C0 1151 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 FAM220AQ7Z4H9 259 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 FAM131BQ86XD5 332 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 SLC37A3Q8NCC5 494 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 SRFBP1Q8NEF9 429 aaKnown RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 ZNF558Q96NG5 402 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 UQCC2Q9BRT2 126 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 FAIM2Q9BWQ8 316 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 LIN28AQ9H9Z2 209 aaKnown RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 TMEM39AQ9NV64 488 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 NKIRAS2Q9NYR9 191 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.82□□□□□ -1.326e-9■■□□□ 13.9
CLCN3-211ENST00000613795 PXDNQ92626 1479 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 FAM86B1E9PN63 330 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 H3BNH8 94 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 WNT10BO00744 389 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 DHX15O43143 795 aaKnown RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 BCAS2O75934 225 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 SLITRK5O94991 958 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 RLN1P04808 185 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 FGRP09769 529 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 YBX3P16989 372 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 PTPN1P18031 435 aaKnown RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 MATN1P21941 496 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 HTR2BP41595 481 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 POLR2JP52435 117 aaKnown RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 CDH15P55291 814 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 GJA9P57773 515 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 NPTX1Q15818 432 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 PFKFB4Q16877 469 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 FAM122CQ6P4D5 195 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 BORAQ6PGQ7 559 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 KLHL24Q6TFL4 600 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 ERMP1Q7Z2K6 904 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 TNS4Q8IZW8 715 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 VGLL2Q8N8G2 317 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 HJURPQ8NCD3 748 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 PTCD2Q8WV60 388 aaKnown RBP6.82□□□□□ -1.32
CLCN3-211ENST00000613795 TNFAIP8L1Q8WVP5 186 aa6.82□□□□□ -1.32
CLCN3-211ENST00000613795 TIFAQ96CG3 184 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms