RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 NPC1L1Q9UHC9 1359 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 LCN1P31025 176 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 PON3Q15166 354 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 C1orf186Q6ZWK4 172 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 RAB2BQ8WUD1 216 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 C7orf50Q9BRJ6 194 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 POLR1EQ9GZS1 481 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 FARSBQ9NSD9 589 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 A8MVJ9 347 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ZNF286BP0CG31 522 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 HSD11B1P28845 292 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 DLSTP36957 453 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 KCNJ2P63252 427 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ECT2LQ008S8 904 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 MAD2L1BPQ15013 274 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 CCNYL2Q5T2Q4 361 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 C16orf59Q7L2K0 433 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ESX1Q8N693 406 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 EZH1Q92800 747 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 AGPAT3Q9NRZ7 376 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 PRMT5O14744 637 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 FARS2O95363 451 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ATXN7L3Q14CW9 347 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 SSX2Q16385 188 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 STK35Q8TDR2 534 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 OR14A2Q96R54 314 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ATP13A3Q9H7F0 1226 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 LYARQ9NX58 379 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 EGFL7Q9UHF1 273 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 PTPRKQ15262 1439 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 CASTOR2A6NHX0 329 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 PROSCO94903 275 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 KDM5CP41229 1560 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 MAGEA3P43357 314 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 CCR3P51677 355 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 IFI35P80217 286 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 BNIP1Q12981 228 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ARCQ7LC44 396 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 C12orf45Q8N5I9 185 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ZSCAN4Q8NAM6 433 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 FAM13CQ8NE31 585 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 OR5T2Q8NGG2 359 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ARMC5Q96C12 935 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 RCN3Q96D15 328 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 UXTQ9UBK9 157 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 TBX1O43435 398 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 PRKAR1BP31321 381 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ACADVLP49748 655 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ELAVL2Q12926 359 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 BAATQ14032 418 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ELOAQ14241 798 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ELOA2Q8IYF1 753 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 PDLIM2Q96JY6 352 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 NXF3Q9H4D5 531 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 FBXL3Q9UKT7 428 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ZMYM2Q9UBW7 1377 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 CDK12Q9NYV4 1490 aaPredicted RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 ABLIM1O14639 778 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 GRID2O43424 1007 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 RYKP34925 604 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 SNRPD1P62314 119 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
ALMS1-206ENST00000613296 CPSF1Q10570 1443 aaKnown RBP8.32□□□□□ -1.08
ALMS1-206ENST00000613296 HBP1O60381 514 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 ST3GAL1Q11201 340 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 ZNF517Q6ZMY9 492 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-206ENST00000613296 OR14K1Q8NGZ2 314 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 USP20Q9Y2K6 914 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 A0A0J9YVX5 310 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 DAPL1A0PJW8 107 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 PCDHGA12O60330 932 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 SNAPC5O75971 98 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 NYAP1Q6ZVC0 841 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 ACBD4Q8NC06 268 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 C8orf48Q96LL4 319 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 GAL3ST4Q96RP7 486 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 AARSD1Q9BTE6 412 aaKnown RBP8.31□□□□□ -1.08
ALMS1-206ENST00000613296 TSPAN15O95858 294 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 PUM1Q14671 1186 aaKnown RBP eCLIP8.31□□□□□ -1.08
ALMS1-206ENST00000613296 GNMTQ14749 295 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 C17orf64Q86WR6 236 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.31□□□□□ -1.082e-6■■■■□ 22.1
ALMS1-206ENST00000613296 EFCAB9A8MZ26 197 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 E7EQ34 232 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 PEX14O75381 377 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 ZNF35P13682 527 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 COL28A1Q2UY09 1125 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 MPZL3Q6UWV2 235 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 CHSY3Q70JA7 882 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 TNS4Q8IZW8 715 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 SLC43A3Q8NBI5 491 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 MFSD3Q96ES6 412 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 M0R233 179 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 PQBP1O60828 265 aaKnown RBP8.31□□□□□ -1.08
ALMS1-206ENST00000613296 CPN2P22792 545 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 AHCYP23526 432 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 ERVK-9P63128 1117 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 PLEKHG4Q58EX7 1191 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 DCST1Q5T197 706 aa8.31□□□□□ -1.08
ALMS1-206ENST00000613296 LYPLAL1Q5VWZ2 237 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms