RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 BRSK1Q8TDC3 778 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 CRELD1Q96HD1 420 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF778Q96MU6 729 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 DEPDC7Q96QD5 511 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 VPS35Q96QK1 796 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 GFM1Q96RP9 751 aaKnown RBP12.49□□□□□ -0.41
CSTF1-208ENST00000613138 SEMA6CQ9H3T2 930 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 LRRC40Q9H9A6 602 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 ARNT2Q9HBZ2 717 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 RAB6BQ9NRW1 208 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 RAD18Q9NS91 495 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 FAM8A1Q9UBU6 413 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 SLC2A6Q9UGQ3 507 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 SATB2Q9UPW6 733 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 AHCTF1Q8WYP5 2266 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 PRR19A6NJB7 356 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 C2orf81A6NN90 581 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 RHPN2P1A8MT19 583 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 SGTAO43765 313 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 SRP72O76094 671 aaKnown RBP12.48□□□□□ -0.41
CSTF1-208ENST00000613138 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
CSTF1-208ENST00000613138 BRAFP15056 766 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 CSF2RBP32927 897 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 VPS41P49754 854 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 GABREP78334 506 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 CRADDP78560 199 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 INSCQ1MX18 579 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 PDPK2PQ6A1A2 396 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 TMEM220Q6QAJ8 160 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 C19orf48Q6RUI8 117 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF574Q6ZN55 896 aaPredicted RBP12.48□□□□□ -0.41
CSTF1-208ENST00000613138 LRRTM4Q86VH4 590 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 CACTIN-AS1Q8N1I8 211 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 SFRP1Q8N474 314 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 LILRA3Q8N6C8 439 aaPredicted RBP12.48□□□□□ -0.41
CSTF1-208ENST00000613138 DDHD1Q8NEL9 900 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 JPH3Q8WXH2 748 aaPredicted RBP12.48□□□□□ -0.41
CSTF1-208ENST00000613138 SGF29Q96ES7 293 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 PRR11Q96HE9 360 aaPredicted RBP12.48□□□□□ -0.41
CSTF1-208ENST00000613138 SRPK1Q96SB4 655 aaKnown RBP12.48□□□□□ -0.41
CSTF1-208ENST00000613138 ASB8Q9H765 288 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 EPB41L5Q9HCM4 733 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 TTC7AQ9ULT0 858 aaPredicted RBP12.48□□□□□ -0.41
CSTF1-208ENST00000613138 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
CSTF1-208ENST00000613138 ZFYVE26Q68DK2 2539 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 PTPRQQ9UMZ3 2332 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 OR52A4PA6NMU1 304 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 FANCGO15287 622 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 NUDT21O43809 227 aaKnown RBP12.47□□□□□ -0.41
CSTF1-208ENST00000613138 CD1CP29017 333 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 AKT1P31749 480 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 STIP1P31948 543 aaKnown RBP12.47□□□□□ -0.41
CSTF1-208ENST00000613138 MC4RP32245 332 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 SEMA5AQ13591 1074 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 LRP8Q14114 963 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 NFE2L1Q14494 772 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 RTP5Q14D33 572 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 FNBP1LQ5T0N5 605 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 IYDQ6PHW0 289 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF438Q7Z4V0 828 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 PIANPQ8IYJ0 282 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 RASGEF1CQ8N431 466 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 RCBTB1Q8NDN9 531 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 NXPE2Q96DL1 559 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 RNF31Q96EP0 1072 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 NAF1Q96HR8 494 aaKnown RBP12.47□□□□□ -0.41
CSTF1-208ENST00000613138 DCBLD2Q96PD2 775 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 OSBPL9Q96SU4 736 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 TBC1D10AQ9BXI6 508 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 RMI1Q9H9A7 625 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF624Q9P2J8 865 aaPredicted RBP12.47□□□□□ -0.41
CSTF1-208ENST00000613138 PSMD13Q9UNM6 376 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 JRKLQ9Y4A0 524 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 NBEAQ8NFP9 2946 aa12.47□□□□□ -0.41
CSTF1-208ENST00000613138 IGHV1OR21-1A0A087WYE8 117 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 KMOO15229 486 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 VEGFDO43915 354 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 POP7O75817 140 aaKnown RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 CRTAMO95727 393 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 APRTP07741 180 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 FDFT1P37268 417 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 ETV5P41161 510 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 SLC19A1P41440 591 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 MAPK9P45984 424 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 LMAN1P49257 510 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 BASP1P80723 227 aaKnown RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 CLCA4Q14CN2 919 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 ZRANB3Q5FWF4 1079 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 ANKRD22Q5VYY1 191 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 DUS1LQ6P1R4 473 aaKnown RBP12.46□□□□□ -0.41
CSTF1-208ENST00000613138 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF534Q76KX8 674 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 GSTA5Q7RTV2 222 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 SLITRK4Q8IW52 837 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 DNAAF3Q8N9W5 541 aa12.46□□□□□ -0.41
CSTF1-208ENST00000613138 UBE2Q2Q8WVN8 375 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms