RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ST14Q9Y5Y6 855 aa10.77□□□□□ -0.69
FAM3A-221ENST00000612856 LINC00854A0A1B0GVQ3 168 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 PSMD11O00231 422 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 CLIC3O95833 236 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 MPP1Q00013 466 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 LRRC38Q5VT99 294 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 SETD3Q86TU7 594 aaPredicted RBP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 CPNE9Q8IYJ1 553 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 BPIFB6Q8NFQ5 453 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 RLN3Q8WXF3 142 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 IGSF8Q969P0 613 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 SIPA1Q96FS4 1042 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 CASD1Q96PB1 797 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 DGCR6LQ9BY27 220 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 PRDM16Q9HAZ2 1276 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 KCNK13Q9HB14 408 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 FKBPLQ9UIM3 349 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 GMEB2Q9UKD1 530 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 SLC13A4Q9UKG4 626 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 RAB23Q9ULC3 237 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 ARL5AQ9Y689 179 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 ALDH1A2O94788 518 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 STATHP02808 62 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 LPOP22079 712 aaPredicted RBP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 EPHA3P29320 983 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 YAP1P46937 504 aaKnown RBP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 DHPSP49366 369 aaPredicted RBP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 GRSF1Q12849 480 aaKnown RBP eCLIP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 CRY1Q16526 586 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 RTL3Q8N8U3 475 aaKnown RBP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 SCAIQ8N9R8 606 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 C12orf43Q96C57 262 aaKnown RBP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 CERS2Q96G23 380 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 PPP1R16AQ96I34 528 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 PBX4Q9BYU1 374 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 COQ10BQ9H8M1 238 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 PPCSQ9HAB8 311 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 TRIM39Q9HCM9 518 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 GSAPA4D1B5 854 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 FAM149AA5PLN7 773 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF840PA6NDX5 716 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 A6NL46 340 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 ADH5P11766 374 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 XRCC1P18887 633 aaPredicted RBP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 ME2P23368 584 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 PTPN9P43378 593 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 HSPA13P48723 471 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 SERPINB9P50453 376 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 CYP4F2P78329 520 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 CPSF6Q16630 551 aaKnown RBP eCLIP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 MS4A13Q5J8X5 152 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 AARS2Q5JTZ9 985 aaKnown RBP10.76□□□□□ -0.69
FAM3A-221ENST00000612856 ADGRD1Q6QNK2 874 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 OFCC1Q8IZS5 231 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 COPS8Q99627 209 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 PKP2Q99959 881 aa10.76□□□□□ -0.69
FAM3A-221ENST00000612856 ISM1B1AKI9 464 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TIMM44O43615 452 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 KRT8P05787 483 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 APOA4P06727 396 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 PFKMP08237 780 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 HNRNPLP14866 589 aaKnown RBP eCLIP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CPA3P15088 417 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 ZNF182P17025 639 aaPredicted RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 RAD23AP54725 363 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 ECT2LQ008S8 904 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SULT2A1Q06520 285 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 ITFG1Q8TB96 612 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 HTRA1Q92743 480 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 AGAP2Q99490 1192 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 COQ7Q99807 217 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 NAT9Q9BTE0 207 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 KATNBL1Q9H079 304 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 INIPQ9NRY2 104 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 C6orf203Q9P0P8 240 aaPredicted RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SIRPGQ9P1W8 387 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 ITGB1BP2Q9UKP3 347 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 FZD10Q9ULW2 581 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 PRELID1Q9Y255 219 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 MICAL3Q7RTP6 2002 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 KPNA4O00629 521 aaPredicted RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TPP1O14773 563 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 PTPN3P26045 913 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 INCA1Q0VD86 236 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 KLF1Q13351 362 aaPredicted RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 PDGFRLQ15198 375 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 OTUD3Q5T2D3 398 aaPredicted RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SLC9A4Q6AI14 798 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TMEM26Q6ZUK4 368 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 Q7L0L9 218 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 OTULINQ96BN8 352 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 CENPOQ9BU64 300 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 HERC2P3Q9BVR0 1158 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 PARVBQ9HBI1 364 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TCF7L2Q9NQB0 619 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SOHLH2Q9NX45 425 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 SAGE1Q9NXZ1 904 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 TMED5Q9Y3A6 229 aa10.75□□□□□ -0.69
FAM3A-221ENST00000612856 ZFHX2Q9C0A1 2572 aaPredicted RBP10.75□□□□□ -0.69
FAM3A-221ENST00000612856 A0A087WXM4 84 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms