RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 GPR18Q14330 331 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 GALNT3Q14435 633 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 PAFAH1B3Q15102 231 aaKnown RBP23.04■■□□□ 1.28
MMP28-203ENST00000612672 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.04■■□□□ 1.28
MMP28-203ENST00000612672 ATP13A4Q4VNC1 1196 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 TDRD12Q587J7 1177 aaKnown RBP23.04■■□□□ 1.28
MMP28-203ENST00000612672 CACHD1Q5VU97 1274 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 PWWP2BQ6NUJ5 590 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 SSC4DQ8WTU2 575 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 ISCUQ9H1K1 167 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 TMPRSS11EQ9UL52 423 aa23.04■■□□□ 1.28
MMP28-203ENST00000612672 PIRTP0C851 137 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 CD86P42081 329 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 DRG2P55039 364 aaKnown RBP23.03■■□□□ 1.28
MMP28-203ENST00000612672 RPL26P61254 145 aaKnown RBP23.03■■□□□ 1.28
MMP28-203ENST00000612672 KRT81Q14533 505 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 INSCQ1MX18 579 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 ANKRD20A8PQ5CZ79 823 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 ZNF569Q5MCW4 686 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 TRIM48Q8IWZ4 208 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 NIPA2Q8N8Q9 360 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 SPATA16Q9BXB7 569 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 MRPL47Q9HD33 250 aaKnown RBP23.03■■□□□ 1.28
MMP28-203ENST00000612672 SLC40A1Q9NP59 571 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 AIPL1Q9NZN9 384 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 CHMP5Q9NZZ3 219 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 PADI1Q9ULC6 663 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 RPL26L1Q9UNX3 145 aaKnown RBP23.03■■□□□ 1.28
MMP28-203ENST00000612672 MAP4K5Q9Y4K4 846 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 SPTBP11277 2137 aa23.03■■□□□ 1.28
MMP28-203ENST00000612672 IGHV5-51A0A0C4DH38 117 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 PDZK1P1A8MUH7 402 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 ANKRD66B4E2M5 251 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 FOLR1P15328 257 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 ZNF7P17097 686 aaPredicted RBP23.02■■□□□ 1.28
MMP28-203ENST00000612672 NELFEP18615 380 aaKnown RBP23.02■■□□□ 1.28
MMP28-203ENST00000612672 CDK11BP21127 795 aaKnown RBP23.02■■□□□ 1.28
MMP28-203ENST00000612672 GBE1Q04446 702 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 SLC10A2Q12908 348 aaPredicted RBP23.02■■□□□ 1.28
MMP28-203ENST00000612672 IRGCQ6NXR0 463 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 C11orf96Q7Z7L8 435 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 PPP1R3BQ86XI6 285 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 LRRC49Q8IUZ0 686 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 AVL9Q8NBF6 648 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 GPR150Q8NGU9 434 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 MLPHQ9BV36 600 aaPredicted RBP23.02■■□□□ 1.28
MMP28-203ENST00000612672 TRIM39Q9HCM9 518 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 MLXIPLQ9NP71 852 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 TRIM10Q9UDY6 481 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 WDR37Q9Y2I8 494 aa23.02■■□□□ 1.28
MMP28-203ENST00000612672 RGSL1A5PLK6 1076 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 SLC25A14O95258 325 aaPredicted RBP23.01■■□□□ 1.27
MMP28-203ENST00000612672 MYBL1P10243 752 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 COL8A1P27658 744 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 ZNF787Q6DD87 383 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 EFCAB3Q8N7B9 438 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 FATE1Q969F0 183 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 GLYATL1Q969I3 302 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 TSGA13Q96PP4 275 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 TRIB3Q96RU7 358 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 THAP2Q9H0W7 228 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 POT1Q9NUX5 634 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 LUZP4Q9P127 313 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 SHOC2Q9UQ13 582 aa23.01■■□□□ 1.27
MMP28-203ENST00000612672 C21orf140B9A014 251 aa23■■□□□ 1.27
MMP28-203ENST00000612672 MTA2O94776 668 aa23■■□□□ 1.27
MMP28-203ENST00000612672 RECKO95980 971 aa23■■□□□ 1.27
MMP28-203ENST00000612672 SLC4A1P02730 911 aa23■■□□□ 1.27
MMP28-203ENST00000612672 CCNYL3P0C7X3 344 aa23■■□□□ 1.27
MMP28-203ENST00000612672 CES1P23141 567 aa23■■□□□ 1.27
MMP28-203ENST00000612672 CCNCP24863 283 aa23■■□□□ 1.27
MMP28-203ENST00000612672 ZBTB17Q13105 803 aa23■■□□□ 1.27
MMP28-203ENST00000612672 MRPL49Q13405 166 aaKnown RBP23■■□□□ 1.27
MMP28-203ENST00000612672 PIGHQ14442 188 aaPredicted RBP23■■□□□ 1.27
MMP28-203ENST00000612672 IFI16Q16666 785 aaKnown RBP23■■□□□ 1.27
MMP28-203ENST00000612672 UGT8Q16880 541 aa23■■□□□ 1.27
MMP28-203ENST00000612672 TIGD7Q6NT04 549 aaPredicted RBP23■■□□□ 1.27
MMP28-203ENST00000612672 ABRAXAS1Q6UWZ7 409 aa23■■□□□ 1.27
MMP28-203ENST00000612672 PQLC3Q8N755 202 aa23■■□□□ 1.27
MMP28-203ENST00000612672 CNTD1Q8N815 330 aa23■■□□□ 1.27
MMP28-203ENST00000612672 Q8NA96 180 aa23■■□□□ 1.27
MMP28-203ENST00000612672 SLC41A2Q96JW4 573 aa23■■□□□ 1.27
MMP28-203ENST00000612672 TIMM29Q9BSF4 260 aa23■■□□□ 1.27
MMP28-203ENST00000612672 NUP85Q9BW27 656 aa23■■□□□ 1.27
MMP28-203ENST00000612672 RTN4Q9NQC3 1192 aaKnown RBP23■■□□□ 1.27
MMP28-203ENST00000612672 SEMA5BQ9P283 1151 aa23■■□□□ 1.27
MMP28-203ENST00000612672 EPHA6Q9UF33 1036 aa23■■□□□ 1.27
MMP28-203ENST00000612672 AMACRQ9UHK6 382 aa23■■□□□ 1.27
MMP28-203ENST00000612672 ANAPC7Q9UJX3 599 aa23■■□□□ 1.27
MMP28-203ENST00000612672 ARGFXA6NJG6 315 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 EBLN1P0CF75 366 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 GJC1P36383 396 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 KLHL30Q0D2K2 578 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 TUBB3Q13509 450 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 FAM69BQ5VUD6 431 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 LRRTM4Q86VH4 590 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 CCHCR1Q8TD31 782 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 TRIM11Q96F44 468 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 CEP41Q9BYV8 373 aa22.99■■□□□ 1.27
MMP28-203ENST00000612672 KCNK1O00180 336 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms