RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 JCHAINP01591 159 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 CD1EP15812 388 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 PPP1R2P41236 205 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 PTSQ03393 145 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 TRAF2Q12933 501 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 GPR18Q14330 331 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 LBRQ14739 615 aaKnown RBP10.09□□□□□ -0.79
SSX3-204ENST00000612497 SEPT7Q16181 437 aaKnown RBP10.09□□□□□ -0.79
SSX3-204ENST00000612497 PLEKHS1Q5SXH7 462 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 ARHGAP36Q6ZRI8 547 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 ZNF765Q7L2R6 523 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 MRGPRGQ86SM5 289 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 NLRP8Q86W28 1048 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 GALNT16Q8N428 558 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 AOPEPQ8N6M6 819 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 RELTQ969Z4 430 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 FER1L6-AS2Q96M78 137 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 MCCC1Q96RQ3 725 aaPredicted RBP10.09□□□□□ -0.79
SSX3-204ENST00000612497 ZBTB20Q9HC78 741 aaPredicted RBP10.09□□□□□ -0.79
SSX3-204ENST00000612497 KCND1Q9NSA2 647 aa10.09□□□□□ -0.79
SSX3-204ENST00000612497 SUCOQ9UBS9 1254 aaKnown RBP10.09□□□□□ -0.79
SSX3-204ENST00000612497 DOCK10Q96BY6 2186 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 MAP1AP78559 2803 aaPredicted RBP10.08□□□□□ -0.8
SSX3-204ENST00000612497 A0A1W2PQJ5 194 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 PGLSO95336 258 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 HSP90AA1P07900 732 aaKnown RBP10.08□□□□□ -0.8
SSX3-204ENST00000612497 MMEP08473 750 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 TUBB4BP68371 445 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 NOMO3P69849 1222 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 HSD11B2P80365 405 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 IL10RBQ08334 325 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 SLC10A7Q0GE19 358 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 CDC16Q13042 620 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 TUBB2AQ13885 445 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 GPR19Q15760 415 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 HIF1AQ16665 826 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 ARMC12Q5T9G4 340 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 PRAMEF17Q5VTA0 474 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 MRGPREQ86SM8 312 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 KMT5CQ86Y97 462 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 DSELQ8IZU8 1212 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 NDUFAF2Q8N183 169 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 ZNF808Q8N4W9 903 aaPredicted RBP10.08□□□□□ -0.8
SSX3-204ENST00000612497 CPT1BQ92523 772 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 SNX21Q969T3 373 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 CXorf40BQ96DE9 158 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 CLIP3Q96DZ5 547 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 PCMTD1Q96MG8 357 aaPredicted RBP10.08□□□□□ -0.8
SSX3-204ENST00000612497 LRFN5Q96NI6 719 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 SMIM14Q96QK8 99 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 NUDCD1Q96RS6 583 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 MAP3K3Q99759 626 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 WDR77Q9BQA1 342 aaPredicted RBP10.08□□□□□ -0.8
SSX3-204ENST00000612497 TUBB2BQ9BVA1 445 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 RAB33BQ9H082 229 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 NOD2Q9HC29 1040 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 SLC40A1Q9NP59 571 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 SIX2Q9NPC8 291 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 POT1Q9NUX5 634 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 SEMA5BQ9P283 1151 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 CNOT6Q9ULM6 557 aaKnown RBP10.08□□□□□ -0.8
SSX3-204ENST00000612497 FZD10Q9ULW2 581 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 NOVA2Q9UNW9 492 aaKnown RBP10.08□□□□□ -0.8
SSX3-204ENST00000612497 CSAG2Q9Y5P2 127 aa10.08□□□□□ -0.8
SSX3-204ENST00000612497 UBA6A0AVT1 1052 aaPredicted RBP10.07□□□□□ -0.8
SSX3-204ENST00000612497 PEX12O00623 359 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 KCNN4O15554 427 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 NUAK1O60285 661 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 JRKO75564 520 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 MTA2O94776 668 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 KRT3P12035 628 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 CD99P14209 185 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 DRD2P14416 443 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 ZNF8P17098 575 aaPredicted RBP10.07□□□□□ -0.8
SSX3-204ENST00000612497 GPD1P21695 349 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 RPL10P27635 214 aaKnown RBP10.07□□□□□ -0.8
SSX3-204ENST00000612497 RFC1P35251 1148 aaPredicted RBP10.07□□□□□ -0.8
SSX3-204ENST00000612497 CLCNKAP51800 687 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 NCF4Q15080 339 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 INSCQ1MX18 579 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 PLA2G4EQ3MJ16 856 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 TDRD12Q587J7 1177 aaKnown RBP10.07□□□□□ -0.8
SSX3-204ENST00000612497 DCAF10Q5QP82 559 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 CRTC3Q6UUV7 619 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 FAM180AQ6UWF9 173 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 FAM198BQ6UWH4 519 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 NOP9Q86U38 636 aaKnown RBP10.07□□□□□ -0.8
SSX3-204ENST00000612497 D2HGDHQ8N465 521 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 OR8K5Q8NH50 307 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 IP6K3Q96PC2 410 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 C11orf70Q9BRQ4 267 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 CARD9Q9H257 536 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 ARFGAP3Q9NP61 516 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 ATXN10Q9UBB4 475 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 DNAJC16Q9Y2G8 782 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 PADI2Q9Y2J8 665 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 CACNA1CQ13936 2221 aa10.07□□□□□ -0.8
SSX3-204ENST00000612497 ANKRD12Q6UB98 2062 aa10.06□□□□□ -0.8
SSX3-204ENST00000612497 TRGV8A0A0C4DH27 118 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms