RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CCDC70Q6NSX1 233 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 SPATA22Q8NHS9 363 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 C9orf72Q96LT7 481 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 CHP1Q99653 195 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 SIDT1Q9NXL6 827 aaKnown RBP17.51■□□□□ 0.39
SSBP1-215ENST00000612337 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
SSBP1-215ENST00000612337 OGFRQ9NZT2 677 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 ZNF624Q9P2J8 865 aaPredicted RBP17.51■□□□□ 0.39
SSBP1-215ENST00000612337 TUBD1Q9UJT1 453 aa17.51■□□□□ 0.39
SSBP1-215ENST00000612337 SPENQ96T58 3664 aaKnown RBP17.51■□□□□ 0.39
SSBP1-215ENST00000612337 NKX2-8O15522 239 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 UBXN7O94888 489 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 DLGAP3O95886 979 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 PTPN3P26045 913 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 SLC19A1P41440 591 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 SLC1A1P43005 524 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 CCR10P46092 362 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 GFERP55789 205 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 DYNLT1P63172 113 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 KCNAB2Q13303 367 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 PRKD1Q15139 912 aaPredicted RBP17.5■□□□□ 0.39
SSBP1-215ENST00000612337 ABRAXAS1Q6UWZ7 409 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 B4GALNT4Q76KP1 1039 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 ZNF547Q8IVP9 402 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 TRIM48Q8IWZ4 208 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 RHOT1Q8IXI2 618 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 RNF25Q96BH1 459 aaPredicted RBP17.5■□□□□ 0.39
SSBP1-215ENST00000612337 TEKT5Q96M29 485 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 CCDC42Q96M95 316 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 VPS35Q96QK1 796 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 NHEJ1Q9H9Q4 299 aaPredicted RBP17.5■□□□□ 0.39
SSBP1-215ENST00000612337 ABHD10Q9NUJ1 306 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 DNAJC16Q9Y2G8 782 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 SLC30A1Q9Y6M5 507 aa17.5■□□□□ 0.39
SSBP1-215ENST00000612337 RELNP78509 3460 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 PDZK1P1A8MUH7 402 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 AURKAO14965 403 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 TOX3O15405 576 aaPredicted RBP17.49■□□□□ 0.39
SSBP1-215ENST00000612337 MTX2O75431 263 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 PMPCBO75439 489 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 CDK14O94921 469 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 TPM1P09493 284 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 TYRP1P17643 537 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 NOP2P46087 812 aaKnown RBP17.49■□□□□ 0.39
SSBP1-215ENST00000612337 NR2C2P49116 596 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 MAP7Q14244 749 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 SEPT7Q16181 437 aaKnown RBP17.49■□□□□ 0.39
SSBP1-215ENST00000612337 KHDC1Q4VXA5 237 aaKnown RBP17.49■□□□□ 0.39
SSBP1-215ENST00000612337 AGAP9Q5VTM2 703 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 MFSD7Q6UXD7 560 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 WASH2PQ6VEQ5 465 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 BZW1Q7L1Q6 419 aaKnown RBP17.49■□□□□ 0.39
SSBP1-215ENST00000612337 UNC5BQ8IZJ1 945 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 ESX1Q8N693 406 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 ANP32EQ9BTT0 268 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 WASH6PQ9NQA3 447 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 POT1Q9NUX5 634 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 TMPRSS11EQ9UL52 423 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 SPO11Q9Y5K1 396 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 PTPN13Q12923 2485 aa17.49■□□□□ 0.39
SSBP1-215ENST00000612337 PRKAR1AP10644 381 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 BRAFP15056 766 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 AMD1P17707 334 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 IDSP22304 550 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 RPL10P27635 214 aaKnown RBP17.48■□□□□ 0.39
SSBP1-215ENST00000612337 HMGCLP35914 325 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 STAT5AP42229 794 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 MC1RQ01726 317 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 FOXM1Q08050 763 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 CDC20Q12834 499 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 TCEAL1Q15170 157 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 TAZQ16635 292 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 ATP13A5Q4VNC0 1218 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 CRTC2Q53ET0 693 aaPredicted RBP17.48■□□□□ 0.39
SSBP1-215ENST00000612337 C11orf96Q7Z7L8 435 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 VSTM4Q8IW00 320 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 RBM12BQ8IXT5 1001 aaKnown RBP17.48■□□□□ 0.39
SSBP1-215ENST00000612337 TFB1MQ8WVM0 346 aaKnown RBP17.48■□□□□ 0.39
SSBP1-215ENST00000612337 TGM7Q96PF1 710 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 TRABDQ9H4I3 376 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 BPIFA1Q9NP55 256 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 UBP1Q9NZI7 540 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 FAM153AQ9UHL3 310 aa17.48■□□□□ 0.39
SSBP1-215ENST00000612337 ZNF106Q9H2Y7 1883 aaKnown RBP17.48■□□□□ 0.39
SSBP1-215ENST00000612337 LOC285095A0A1B0GVY8 99 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 MFAP3LO75121 409 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 TNNT1P13805 278 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 VCLP18206 1134 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 CD68P34810 354 aaPredicted RBP17.47■□□□□ 0.39
SSBP1-215ENST00000612337 CDKN2BP42772 138 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 CAPZBP47756 277 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 WASHC5Q12768 1159 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 TMEM115Q12893 351 aaPredicted RBP17.47■□□□□ 0.39
SSBP1-215ENST00000612337 TFDP2Q14188 446 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 SKOR2Q2VWA4 1001 aaPredicted RBP17.47■□□□□ 0.39
SSBP1-215ENST00000612337 ZDHHC20Q5W0Z9 365 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 KDELC1Q6UW63 502 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 DTX3LQ8TDB6 740 aa17.47■□□□□ 0.39
SSBP1-215ENST00000612337 STARD8Q92502 1023 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms