RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 DNAJC16Q9Y2G8 782 aa12.17□□□□□ -0.46
CBWD3-208ENST00000612050 DNMT3AQ9Y6K1 912 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-208ENST00000612050 KNTC1P50748 2209 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 ARHGEF17Q96PE2 2063 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-208ENST00000612050 TRBV23OR9-2A0A075B6M9 112 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 PLD2O14939 933 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 CHUKO15111 745 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 CEP104O60308 925 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 MTX2O75431 263 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 SRP72O76094 671 aaKnown RBP12.16□□□□□ -0.46
CBWD3-208ENST00000612050 AP2A1O95782 977 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 ITGA2BP08514 1039 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 ADRA1AP35348 466 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 EPHA4P54764 986 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 OR1D5P58170 312 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 CDH17Q12864 832 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 TRA2AQ13595 282 aaKnown RBP eCLIP12.16□□□□□ -0.46
CBWD3-208ENST00000612050 SNX1Q13596 522 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 NR1D2Q14995 579 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 CCNG2Q16589 344 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 GPR33Q49SQ1 333 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 IYDQ6PHW0 289 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 IGF2-ASQ6U949 168 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 AMZ2Q86W34 360 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 JAMLQ86YT9 394 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 RBM12BQ8IXT5 1001 aaKnown RBP12.16□□□□□ -0.46
CBWD3-208ENST00000612050 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 PTCD2Q8WV60 388 aaKnown RBP12.16□□□□□ -0.46
CBWD3-208ENST00000612050 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 CXorf40BQ96DE9 158 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 FOXP3Q9BZS1 431 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 RABGEF1Q9UJ41 708 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 ATXN7L1Q9ULK2 861 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-208ENST00000612050 R3HDM2Q9Y2K5 976 aaKnown RBP12.16□□□□□ -0.46
CBWD3-208ENST00000612050 PLEKHM1Q9Y4G2 1056 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 RP1P56715 2156 aa12.16□□□□□ -0.46
CBWD3-208ENST00000612050 A0A1W2PQM1 296 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 TNFSF15O95150 251 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 FGGP02679 453 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 CSTF2P33240 577 aaKnown RBP eCLIP12.15□□□□□ -0.46
CBWD3-208ENST00000612050 PPARGP37231 505 aaPredicted RBP12.15□□□□□ -0.46
CBWD3-208ENST00000612050 EIF2S3P41091 472 aaKnown RBP12.15□□□□□ -0.46
CBWD3-208ENST00000612050 MAPK9P45984 424 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 UCNP55089 124 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 B4GALNT1Q00973 533 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 NFATC2Q13469 925 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 SPARCL1Q14515 664 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 SKIDA1Q1XH10 827 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 ZNF648Q5T619 568 aaPredicted RBP12.15□□□□□ -0.46
CBWD3-208ENST00000612050 GPRC6AQ5T6X5 926 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 SNX20Q7Z614 316 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 STYXQ8WUJ0 223 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 C1orf54Q8WWF1 131 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 KCNE4Q8WWG9 221 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 PATE1Q8WXA2 126 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 RTP4Q96DX8 246 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 COPS8Q99627 209 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 RDH14Q9HBH5 336 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 RAB6BQ9NRW1 208 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 POT1Q9NUX5 634 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 WDR70Q9NW82 654 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 CPNE7Q9UBL6 633 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 TBC1D29Q9UFV1 150 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 FKBPLQ9UIM3 349 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 JRKLQ9Y4A0 524 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 LOXL2Q9Y4K0 774 aa12.15□□□□□ -0.46
CBWD3-208ENST00000612050 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.47
CBWD3-208ENST00000612050 A0A087WV48 116 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 TCRBV7S2A1N4TA0A589 114 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 HEATR9A2RTY3 570 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 HGSO14964 777 aaPredicted RBP12.14□□□□□ -0.47
CBWD3-208ENST00000612050 PPM1DO15297 605 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 KIF5CO60282 957 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 UGT1A9O60656 530 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 METTL18O95568 372 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 CAPNS1P04632 268 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 AMD1P17707 334 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 UGT1A6P19224 532 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 UGT1A1P22309 533 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 UGT1A4P22310 534 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 UGT1A3P35503 534 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 UGT1A5P35504 534 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 GDF10P55107 478 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 SARNPP82979 210 aaKnown RBP12.14□□□□□ -0.47
CBWD3-208ENST00000612050 TMPRSS15P98073 1019 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 POU6F1Q14863 301 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
CBWD3-208ENST00000612050 ZRANB3Q5FWF4 1079 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 FNBP1LQ5T0N5 605 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 KLHL35Q6PF15 583 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 TMEM220Q6QAJ8 160 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 USP53Q70EK8 1073 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 PLXDC1Q8IUK5 500 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 TAB3Q8N5C8 712 aaPredicted RBP12.14□□□□□ -0.47
CBWD3-208ENST00000612050 OR4D9Q8NGE8 314 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
CBWD3-208ENST00000612050 PBKQ96KB5 322 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 SLC46A1Q96NT5 459 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 DPH1Q9BZG8 443 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms