RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 SPATS1Q496A3 300 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 TIGD5Q53EQ6 642 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 MARC1Q5VT66 337 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 PAQR3Q6TCH7 311 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 GALNT7Q86SF2 657 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 SYVN1Q86TM6 617 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 TMEM86AQ8N2M4 240 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 FAM86B1Q8N7N1 296 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 TAMM41Q96BW9 452 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 RNF112Q9ULX5 631 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 HTTP42858 3142 aa16.8■□□□□ 0.28
TNIP1-220ENST00000610535 TOR1BO14657 336 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 RENBPP51606 427 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 YWHAHQ04917 246 aaPredicted RBP16.79■□□□□ 0.28
TNIP1-220ENST00000610535 TSNQ15631 228 aaKnown RBP16.79■□□□□ 0.28
TNIP1-220ENST00000610535 CRTC3Q6UUV7 619 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 SPATA19Q7Z5L4 167 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 DPP9Q86TI2 863 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 LEMD2Q8NC56 503 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 FKBP10Q96AY3 582 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 SH3YL1Q96HL8 342 aaPredicted RBP16.79■□□□□ 0.28
TNIP1-220ENST00000610535 OSER1Q9NX31 292 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 DAPK2Q9UIK4 370 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 MBLAC1A4D2B0 266 aaPredicted RBP16.79■□□□□ 0.28
TNIP1-220ENST00000610535 CDC7O00311 574 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 TNPO2O14787 897 aaKnown RBP16.79■□□□□ 0.28
TNIP1-220ENST00000610535 PRR35P0CG20 571 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 HOXD8P13378 290 aaPredicted RBP16.79■□□□□ 0.28
TNIP1-220ENST00000610535 AGXTP21549 392 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 HTR1BP28222 390 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 RAD23AP54725 363 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 TUBA3CQ13748 450 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 DPY19L1Q2PZI1 675 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 BRMS1LQ5PSV4 323 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 TAF2Q6P1X5 1199 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 LRRTM3Q86VH5 581 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 PROKR1Q8TCW9 393 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 TSPEARQ8WU66 669 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 PSMG2Q969U7 264 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 ZNF599Q96NL3 588 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 LRRC3Q9BY71 257 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 GALPQ9UBC7 116 aa16.79■□□□□ 0.28
TNIP1-220ENST00000610535 CCL15-CCL14A0A0B4J2E2 113 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 UBA6A0AVT1 1052 aaPredicted RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 SNX2O60749 519 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 ECI2O75521 394 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 ATXN1LP0C7T5 689 aaKnown RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 CDH1P12830 882 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 GSTM2P28161 218 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 PIGAP37287 484 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 MTHFRP42898 656 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 TMED10P49755 219 aaKnown RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 LAPTM5Q13571 262 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 CCL15Q16663 113 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 ANKS6Q68DC2 871 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 PROSER1Q86XN7 944 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 C8orf59Q8N0T1 100 aaPredicted RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 PGBD5Q8N414 524 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 GPRC5AQ8NFJ5 357 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 RHEBL1Q8TAI7 183 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 TSPAN18Q96SJ8 248 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 CYP2S1Q96SQ9 504 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 HBEGFQ99075 208 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 TFB2MQ9H5Q4 396 aaKnown RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 CARS2Q9HA77 564 aaKnown RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 EXD2Q9NVH0 621 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 SUN2Q9UH99 717 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 CPQQ9Y646 472 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 PTGES3LE9PB15 166 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 MAN1A2O60476 641 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 DEAF1O75398 565 aaPredicted RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 JAK1P23458 1154 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 NFKBIAP25963 317 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 CACNB2Q08289 660 aaPredicted RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 CTU2Q2VPK5 515 aaKnown RBP16.78■□□□□ 0.28
TNIP1-220ENST00000610535 SLC16A12Q6ZSM3 486 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 HID1Q8IV36 788 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 ITFG1Q8TB96 612 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 HASPINQ8TF76 798 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 ALPK1Q96QP1 1244 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 YIPF2Q9BWQ6 316 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 AMBRA1Q9C0C7 1298 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 HPS4Q9NQG7 708 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 FAM118AQ9NWS6 357 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 SEPT3Q9UH03 358 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 UTS2RQ9UKP6 389 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 B3GNT3Q9Y2A9 372 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 PCDHB3Q9Y5E6 796 aa16.78■□□□□ 0.28
TNIP1-220ENST00000610535 TMEM247A6NEH6 219 aa16.77■□□□□ 0.28
TNIP1-220ENST00000610535 VPS4BO75351 444 aa16.77■□□□□ 0.28
TNIP1-220ENST00000610535 INMTO95050 263 aa16.77■□□□□ 0.28
TNIP1-220ENST00000610535 ENO2P09104 434 aaPredicted RBP16.77■□□□□ 0.28
TNIP1-220ENST00000610535 TPD52P55327 224 aaPredicted RBP16.77■□□□□ 0.28
TNIP1-220ENST00000610535 SKIV2LQ15477 1246 aaKnown RBP16.77■□□□□ 0.28
TNIP1-220ENST00000610535 CRY1Q16526 586 aa16.77■□□□□ 0.28
TNIP1-220ENST00000610535 SETMARQ53H47 684 aaPredicted RBP16.77■□□□□ 0.28
TNIP1-220ENST00000610535 C6orf141Q5SZD1 244 aa16.77■□□□□ 0.28
TNIP1-220ENST00000610535 STAG3L4Q8TBR4 150 aa16.77■□□□□ 0.28
TNIP1-220ENST00000610535 ISG20Q96AZ6 181 aaKnown RBP16.77■□□□□ 0.28
TNIP1-220ENST00000610535 CCDC138Q96M89 665 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms