RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CACNA2D2Q9NY47 1150 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 CCDC167Q9P0B6 97 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 GALPQ9UBC7 116 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 IKZF3Q9UKT9 509 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 NDUFAF1Q9Y375 327 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 RWDD3Q9Y3V2 267 aa11.83□□□□□ -0.52
USP6NL-206ENST00000609853 EIF3FO00303 357 aaPredicted RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 CASQ2O14958 399 aaPredicted RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 PIP5K1BO14986 540 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 RAD51BO15315 384 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 CFLARO15519 480 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 TCF3P15923 654 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 TSPAN8P19075 237 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 GPX3P22352 226 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 THOP1P52888 689 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 POLR2LP62875 67 aaKnown RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 MRPS35P82673 323 aaKnown RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 UBE3AQ05086 875 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 TRAP1Q12931 704 aaKnown RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 CEACAM7Q14002 265 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 TTLL9Q3SXZ7 439 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 REP15Q6BDI9 236 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 IRGCQ6NXR0 463 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 PRMT9Q6P2P2 845 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 C22orf39Q6P5X5 142 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 FAM151BQ6UXP7 276 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 FRA10AC1Q70Z53 315 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 PHYKPLQ8IUZ5 450 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 DDIASQ8IXT1 998 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 MYO1HQ8N1T3 1032 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 TTC16Q8NEE8 873 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 HMGCLL1Q8TB92 370 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 SHKBP1Q8TBC3 707 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 PYDC1Q8WXC3 89 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 TUBGCP3Q96CW5 907 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 ASB9Q96DX5 294 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 C3orf30Q96M34 536 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 NSUN5Q96P11 429 aaKnown RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 MCCC1Q96RQ3 725 aaPredicted RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 RAD9AQ99638 391 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 NPAS2Q99743 824 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 HOPXQ9BPY8 73 aaPredicted RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 CIPCQ9C0C6 399 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 SPAG4Q9NPE6 437 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 SEMA4BQ9NPR2 832 aaPredicted RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 SDR39U1Q9NRG7 319 aaPredicted RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 RIC8BQ9NVN3 520 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 ZDHHC7Q9NXF8 308 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 PLK2Q9NYY3 685 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 SUCOQ9UBS9 1254 aaKnown RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 CRLS1Q9UJA2 301 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 CLEC4EQ9ULY5 219 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 PSMD13Q9UNM6 376 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 FNDC3AQ9Y2H6 1198 aaKnown RBP11.82□□□□□ -0.52
USP6NL-206ENST00000609853 PCDHGA7Q9Y5G6 932 aa11.82□□□□□ -0.52
USP6NL-206ENST00000609853 ANKRD12Q6UB98 2062 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 MRASO14807 208 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 CCL16O15467 120 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 CLDN7O95471 211 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 HNRNPA1P09651 372 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP6NL-206ENST00000609853 PRR35P0CG20 571 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 CBSLP0DN79 551 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 BPIP17213 487 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 NFKBIAP25963 317 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 HLA-FP30511 346 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 CBSP35520 551 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 BMPR1AP36894 532 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 NSG1P42857 185 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 KLC1Q07866 573 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 BLMHQ13867 455 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 PTPRRQ15256 657 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 KIF19Q2TAC6 998 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 CARD16Q5EG05 197 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 CDKL4Q5MAI5 379 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 SAMD4BQ5PRF9 694 aaKnown RBP11.81□□□□□ -0.52
USP6NL-206ENST00000609853 TRIM68Q6AZZ1 485 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 TTC23LQ6PF05 361 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 GPRIN3Q6ZVF9 776 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 SPNS2Q8IVW8 549 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 NXPE1Q8N323 547 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 KIAA1958Q8N8K9 716 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 PDPRQ8NCN5 879 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 OR6K2Q8NGY2 324 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 ULK4Q96C45 1275 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 ASIC4Q96FT7 647 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 PLEKHG4BQ96PX9 1271 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 FAM126AQ9BYI3 521 aaPredicted RBP11.81□□□□□ -0.52
USP6NL-206ENST00000609853 SLC2A11Q9BYW1 496 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 TNKS2Q9H2K2 1166 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 YY1AP1Q9H869 796 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 SARS2Q9NP81 518 aaKnown RBP11.81□□□□□ -0.52
USP6NL-206ENST00000609853 SPATS2LQ9NUQ6 558 aaKnown RBP11.81□□□□□ -0.52
USP6NL-206ENST00000609853 TDP1Q9NUW8 608 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 CROTQ9UKG9 612 aa11.81□□□□□ -0.52
USP6NL-206ENST00000609853 ATP6AP2A0A1C7CYW4 349 aa11.8□□□□□ -0.52
USP6NL-206ENST00000609853 LRRC14BA6NHZ5 514 aa11.8□□□□□ -0.52
USP6NL-206ENST00000609853 WASH3PC4AMC7 463 aa11.8□□□□□ -0.52
USP6NL-206ENST00000609853 E2F3O00716 465 aa11.8□□□□□ -0.52
USP6NL-206ENST00000609853 PPP6CO00743 305 aa11.8□□□□□ -0.52
USP6NL-206ENST00000609853 FBP2O00757 339 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms