RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 TRIM10Q9UDY6 481 aa18.96■□□□□ 0.63
CTSA-217ENST00000607482 PACSIN2Q9UNF0 486 aaPredicted RBP18.96■□□□□ 0.63
CTSA-217ENST00000607482 PCDHGA7Q9Y5G6 932 aa18.96■□□□□ 0.63
CTSA-217ENST00000607482 IGHV5-10-1A0A0J9YXX1 117 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 HGSO14964 777 aaPredicted RBP18.95■□□□□ 0.62
CTSA-217ENST00000607482 CRTAMO95727 393 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 EML2O95834 649 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 VIPP01282 170 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 ZNF7P17097 686 aaPredicted RBP18.95■□□□□ 0.62
CTSA-217ENST00000607482 ITIH1P19827 911 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 IDSP22304 550 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 PSMB4P28070 264 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 PDE1BQ01064 536 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 TMEM115Q12893 351 aaPredicted RBP18.95■□□□□ 0.62
CTSA-217ENST00000607482 TRA2AQ13595 282 aaKnown RBP eCLIP18.95■□□□□ 0.62
CTSA-217ENST00000607482 CHRNA6Q15825 494 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 LDLRAP1Q5SW96 308 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 ARHGAP40Q5TG30 622 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 AGBL5Q8NDL9 886 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 USP7Q93009 1102 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 SPATA13Q96N96 652 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 UBL7Q96S82 380 aaPredicted RBP18.95■□□□□ 0.62
CTSA-217ENST00000607482 APOL2Q9BQE5 337 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 PRORYQ9H606 182 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 CPNE5Q9HCH3 593 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 CPNE7Q9UBL6 633 aa18.95■□□□□ 0.62
CTSA-217ENST00000607482 PCYT1BQ9Y5K3 369 aaPredicted RBP18.95■□□□□ 0.62
CTSA-217ENST00000607482 KRT86O43790 486 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 MSH3P20585 1137 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 LPOP22079 712 aaPredicted RBP18.94■□□□□ 0.62
CTSA-217ENST00000607482 HALP42357 657 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 LIMK2P53671 638 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 TMEM71Q6P5X7 295 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 CCDC81Q6ZN84 652 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 TMPRSS9Q7Z410 1059 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 FAM129CQ86XR2 697 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 TTC30BQ8N4P2 665 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 RNF10Q8N5U6 811 aaKnown RBP18.94■□□□□ 0.62
CTSA-217ENST00000607482 TIMM29Q9BSF4 260 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 IL17CQ9P0M4 197 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 GUCA1BQ9UMX6 200 aa18.94■□□□□ 0.62
CTSA-217ENST00000607482 PRAMEF33A0A0G2JMD5 474 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 TEX51A0A1B0GUA7 166 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 C5orf60A6NFR6 353 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 A8MU76 341 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 CHUKO15111 745 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 NVLO15381 856 aaKnown RBP18.93■□□□□ 0.62
CTSA-217ENST00000607482 NRDCO43847 1150 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 UGT1A9O60656 530 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 PRAMEF10O60809 474 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 HOXB3P14651 431 aaPredicted RBP18.93■□□□□ 0.62
CTSA-217ENST00000607482 UGT1A6P19224 532 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 UGT1A1P22309 533 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 UGT1A4P22310 534 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 RPL10P27635 214 aaKnown RBP18.93■□□□□ 0.62
CTSA-217ENST00000607482 UGT1A3P35503 534 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 C16orf72Q14CZ0 275 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 TAF1AQ15573 450 aaPredicted RBP18.93■□□□□ 0.62
CTSA-217ENST00000607482 SEL1L2Q5TEA6 688 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 TMEM139Q8IV31 216 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 FAM71DQ8N9W8 422 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 CXorf40BQ96DE9 158 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 DCUN1D1Q96GG9 259 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 ALS2CR12Q96Q35 445 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 TBL1YQ9BQ87 522 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 UGT1A7Q9HAW7 530 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 UGT1A10Q9HAW8 530 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 UGT1A8Q9HAW9 530 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 ARL5AQ9Y689 179 aa18.93■□□□□ 0.62
CTSA-217ENST00000607482 KIF26BQ2KJY2 2108 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 PRAMEF1O95521 474 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 AMD1P17707 334 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 CLCNKAP51800 687 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 EPHA4P54764 986 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 VAC14Q08AM6 782 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 LONRF2Q1L5Z9 754 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 TAF1BQ53T94 588 aaPredicted RBP18.92■□□□□ 0.62
CTSA-217ENST00000607482 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.92■□□□□ 0.62
CTSA-217ENST00000607482 ZNF574Q6ZN55 896 aaPredicted RBP18.92■□□□□ 0.62
CTSA-217ENST00000607482 AMZ2Q86W34 360 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 OR4K2Q8NGD2 314 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 ZNF398Q8TD17 642 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 CCNL2Q96S94 520 aaPredicted RBP18.92■□□□□ 0.62
CTSA-217ENST00000607482 EPB41L1Q9H4G0 881 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 KLHL3Q9UH77 587 aa18.92■□□□□ 0.62
CTSA-217ENST00000607482 KCNJ13O60928 360 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 RALBP11234 206 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 LMAN1P49257 510 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 DRG2P55039 364 aaKnown RBP18.91■□□□□ 0.62
CTSA-217ENST00000607482 CLN3Q13286 438 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 SQSTM1Q13501 440 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 SPARCL1Q14515 664 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 PARP6Q2NL67 630 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 P3H1Q32P28 736 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 WDR74Q6RFH5 385 aaPredicted RBP18.91■□□□□ 0.62
CTSA-217ENST00000607482 RANBP10Q6VN20 620 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 PLXDC1Q8IUK5 500 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 DTX3LQ8TDB6 740 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 TAAR9Q96RI9 348 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 ASB8Q9H765 288 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms