RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 FAM76AQ8TAV0 307 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 TOE1Q96GM8 510 aaKnown RBP16.31■□□□□ 0.2
PMF1-206ENST00000606952 HIC2Q96JB3 615 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 UBXN10Q96LJ8 280 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 PANX3Q96QZ0 392 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 ZCCHC2Q9C0B9 1178 aaKnown RBP16.31■□□□□ 0.2
PMF1-206ENST00000606952 TRIM39Q9HCM9 518 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 MBNL1Q9NR56 388 aaKnown RBP16.31■□□□□ 0.2
PMF1-206ENST00000606952 PCMTD2Q9NV79 361 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 DCDC2Q9UHG0 476 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 CYP8B1Q9UNU6 501 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 DMTF1Q9Y222 760 aa16.31■□□□□ 0.2
PMF1-206ENST00000606952 VCANP13611 3396 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 TMEM120BA0PK00 339 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 TMEM221A6NGB7 291 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 FAM47DPA6NHR8 397 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 GPR89AB7ZAQ6 455 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 F8W8V4 182 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 M0R296 226 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 RAD51BO15315 384 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 PI15O43692 258 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 VPS26AO75436 327 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 SLC25A14O95258 325 aaPredicted RBP16.3■□□□□ 0.2
PMF1-206ENST00000606952 PAK4O96013 591 aaPredicted RBP16.3■□□□□ 0.2
PMF1-206ENST00000606952 GPR89BP0CG08 455 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 TDGF1P13385 188 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 ATP1B2P14415 290 aaPredicted RBP16.3■□□□□ 0.2
PMF1-206ENST00000606952 ZNF37AP17032 561 aaPredicted RBP16.3■□□□□ 0.2
PMF1-206ENST00000606952 MSH3P20585 1137 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 PRLHRP49683 370 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 CLCN7P51798 805 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 SLC12A2P55011 1212 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 CDK3Q00526 305 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 GBX1Q14549 363 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 ADGRG6Q86SQ4 1221 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 CENPLQ8N0S6 344 aaPredicted RBP16.3■□□□□ 0.2
PMF1-206ENST00000606952 TMEM145Q8NBT3 493 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 CD200R1Q8TD46 325 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 DENND1AQ8TEH3 1009 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 DCUN1D1Q96GG9 259 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 ZNF514Q96K75 400 aaPredicted RBP16.3■□□□□ 0.2
PMF1-206ENST00000606952 ACOT9Q9Y305 439 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 DHRS7Q9Y394 339 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 BDP1A6H8Y1 2624 aa16.3■□□□□ 0.2
PMF1-206ENST00000606952 CCDC189A1A4V9 331 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 GOLGA8RI6L899 631 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 EIF3FO00303 357 aaPredicted RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 COPEO14579 308 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 CHUKO15111 745 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 AXIN1O15169 862 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 PHGDHO43175 533 aaKnown RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 NIPSNAP2O75323 286 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 RHOBTB1O94844 696 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 ZWINTO95229 277 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 PCCBP05166 539 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 GSTM1P09488 218 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 OR56A5P0C7T3 313 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 HNRNPA2B1P22626 353 aaKnown RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 ETV4P43268 484 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 CCT5P48643 541 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 KIAA1024LP59773 190 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 GSTM4Q03013 218 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 TMEM115Q12893 351 aaPredicted RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 MPP2Q14168 576 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 TSNAXIP1Q2TAA8 658 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 ZNF658BQ4V348 819 aaPredicted RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 PPM1JQ5JR12 505 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 PTRHD1Q6GMV3 140 aaKnown RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 TMEM207Q6UWW9 146 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 CDHR3Q6ZTQ4 885 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 BMP8AQ7Z5Y6 402 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 HEATR4Q86WZ0 1026 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 CADM4Q8NFZ8 388 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 GIMAP7Q8NHV1 300 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 LKAAEAR1Q8TD35 194 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 PDLIM5Q96HC4 596 aaKnown RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 LINC00615Q96LM1 132 aaPredicted RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 GPR78Q96P69 363 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 TPSD1Q9BZJ3 242 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 C6orf106Q9H6K1 298 aaPredicted RBP16.29■□□□□ 0.2
PMF1-206ENST00000606952 WDR26Q9H7D7 661 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 SYTL2Q9HCH5 934 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 TLK1Q9UKI8 766 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 PLLPQ9Y342 182 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 HS3ST3A1Q9Y663 406 aa16.29■□□□□ 0.2
PMF1-206ENST00000606952 LRP4O75096 1905 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 CEP192Q8TEP8 1941 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 INPP4BO15327 924 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 LILRB5O75023 590 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 KLHL2O95198 593 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 DHRS4L1P0CG22 281 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 MYCLP1P12525 358 aaPredicted RBP16.28■□□□□ 0.2
PMF1-206ENST00000606952 AKT1P31749 480 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 HPDP32754 393 aaPredicted RBP16.28■□□□□ 0.2
PMF1-206ENST00000606952 ZNF460Q14592 562 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 TMEM31Q5JXX7 168 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 KYAT3Q6YP21 454 aaKnown RBP16.28■□□□□ 0.2
PMF1-206ENST00000606952 PIM3Q86V86 326 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 CLDN19Q8N6F1 224 aa16.28■□□□□ 0.2
PMF1-206ENST00000606952 RASGEF1AQ8N9B8 481 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms