RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 STAT5AP42229 794 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 GRIA3P42263 894 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 DPP6P42658 865 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 HTR3AP46098 478 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 NSFP46459 744 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPS5P46782 204 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 GNPDA1P46926 289 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 QARSP47897 775 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TUFMP49411 452 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ALDH7A1P49419 539 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ERFP50548 548 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 NUDT2P50583 147 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ATP4BP51164 291 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 NDST1P52848 882 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PLA2G16P53816 162 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ITGA1P56199 1179 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PSMC6P62333 389 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPL11P62913 178 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 S100A12P80511 92 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TNFAIP2Q03169 654 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PRKCDQ05655 676 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC10A2Q12908 348 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 EPS8Q12929 822 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PRKG1Q13976 671 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 COL9A2Q14055 689 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCLAFQ15004 111 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PDK2Q15119 407 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 VPS72Q15906 364 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 DDR2Q16832 855 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PGS1Q32NB8 556 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYBRD1Q53TN4 286 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 MEX3CQ5U5Q3 659 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZCCHC8Q6NZY4 707 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PNCKQ6P2M8 343 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PRMT9Q6P2P2 845 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMC5Q6UXY8 1006 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF767PQ75MW2 155 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 NIPA1Q7RTP0 329 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 C14orf80Q86SX3 495 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 USP37Q86T82 979 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNX32Q86XE0 403 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PLCZ1Q86YW0 608 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 DNAJC10Q8IXB1 793 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ABRAQ8N0Z2 381 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM109AQ8N4B1 249 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 MYCT1Q8N699 235 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ANKRD52Q8NB46 1076 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 XXYLT1Q8NBI6 393 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR2T34Q8NGX1 318 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR2T3Q8NH03 318 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 SETD6Q8TBK2 473 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 RDH11Q8TC12 318 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 DYNC2LI1Q8TCX1 351 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZFP90Q8TF47 636 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 RSAD2Q8WXG1 361 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 GJA10Q969M2 543 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 MUL1Q969V5 352 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF566Q969W8 418 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ROPN1LQ96C74 230 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 MRRFQ96E11 262 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 AURKBQ96GD4 344 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ELMO2Q96JJ3 720 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CDHR1Q96JP9 859 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 RNF170Q96K19 258 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 CEP170P1Q96L14 293 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZSWIM3Q96MP5 696 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF578Q96N58 590 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 NT5C1BQ96P26 610 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACO2Q99798 780 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 COQ7Q99807 217 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 EBNA1BP2Q99848 306 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 HOPXQ9BPY8 73 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 UQCC2Q9BRT2 126 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 MTG1Q9BT17 334 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 KIFC3Q9BVG8 833 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 FUNDC2Q9BWH2 189 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRIM15Q9C019 465 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF518BQ9C0D4 1074 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 MTMR12Q9C0I1 747 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 NAA50Q9GZZ1 169 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 LHPPQ9H008 270 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM117Q9H0C3 514 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TRPV6Q9H1D0 765 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 UPF3AQ9H1J1 476 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 NOL11Q9H8H0 719 aaKnown RBP4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PLAC1Q9HBJ0 212 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 POPDC2Q9HBU9 364 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM8AQ9HCN3 771 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 C12orf4Q9NQ89 552 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 HPS4Q9NQG7 708 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 AGPAT4Q9NRZ5 378 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 TBC1D22BQ9NU19 505 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACOXLQ9NUZ1 547 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 FBXO28Q9NVF7 368 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 B3GNT2Q9NY97 397 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PAK5Q9P286 719 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 PI4KBQ9UBF8 816 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 FTSJ1Q9UET6 329 aa4.05□□□□□ -1.76
HMGB1P50-201ENST00000605814 ATPIF1Q9UII2 106 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms