RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 CCDC116Q8IYX3 515 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 LSMEM2Q8N112 164 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 TTC30BQ8N4P2 665 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 FAM71DQ8N9W8 422 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 PATE1Q8WXA2 126 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 GRAMD1AQ96CP6 724 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 EID2BQ96D98 161 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 ITPKCQ96DU7 683 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 SCARF2Q96GP6 870 aaPredicted RBP5.79□□□□□ -1.48
FOCAD-213ENST00000604254 ATXN7L3BQ96GX2 97 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 TTC25Q96NG3 672 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 TMEM74Q96NL1 305 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 TBL1YQ9BQ87 522 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 APOL2Q9BQE5 337 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 GORASP1Q9BQQ3 440 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 ZCCHC2Q9C0B9 1178 aaKnown RBP5.79□□□□□ -1.48
FOCAD-213ENST00000604254 STRADBQ9C0K7 418 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 OR2AG1Q9H205 316 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 CARD9Q9H257 536 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 LRRN3Q9H3W5 708 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 POLR1BQ9H9Y6 1135 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 TRIM39Q9HCM9 518 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 LZTFL1Q9NQ48 299 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.79□□□□□ -1.48
FOCAD-213ENST00000604254 ATXN10Q9UBB4 475 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 APPL1Q9UKG1 709 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 ATXN7L1Q9ULK2 861 aaPredicted RBP5.79□□□□□ -1.48
FOCAD-213ENST00000604254 CNOT6Q9ULM6 557 aaKnown RBP5.79□□□□□ -1.48
FOCAD-213ENST00000604254 SATB2Q9UPW6 733 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 KCNK6Q9Y257 313 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 PLEKHM1Q9Y4G2 1056 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 PCDHB11Q9Y5F2 797 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 ENTPD2Q9Y5L3 495 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 MYO18BQ8IUG5 2567 aa5.79□□□□□ -1.48
FOCAD-213ENST00000604254 GLYATL1P3A0A0U1RQE8 302 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 A0A1W2PQM1 296 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 TCRBV7S2A1N4TA0A589 114 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 C5orf60A6NFR6 353 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 CYSRT1A8MQ03 144 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 TMX2-CTNND1H3BSU7 103 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 KMOO15229 486 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 CASC3O15234 703 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 STX7O15400 261 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 BUD23O43709 281 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 TLX3O43711 291 aaPredicted RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 VEGFDO43915 354 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 NUAK1O60285 661 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 SNX2O60749 519 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 PPFIA2O75334 1257 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 MTX2O75431 263 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 PRAMEF1O95521 474 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 CRTAMO95727 393 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 JMJD7P0C870 316 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ZNF8P17098 575 aaPredicted RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 VCLP18206 1134 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 LPOP22079 712 aaPredicted RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 RBMS1P29558 406 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 AKT1P31749 480 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ABCG1P45844 678 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 SCTRP47872 440 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 LSSP48449 732 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 PDX1P52945 283 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 WDR4P57081 412 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 PCBP4P57723 403 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 OR1D5P58170 312 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 PDE1BQ01064 536 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 HHEXQ03014 270 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 EIF3IQ13347 325 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 OLIG2Q13516 323 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ITGA9Q13797 1035 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 RPS6KA1Q15418 735 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 TAF1AQ15573 450 aaPredicted RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 SEPT7Q16181 437 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 AMZ1Q400G9 498 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ATP13A5Q4VNC0 1218 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 OXLD1Q5BKU9 147 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 LDLRAP1Q5SW96 308 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ZNF648Q5T619 568 aaPredicted RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 PHF19Q5T6S3 580 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 OGFOD3Q6PK18 319 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 C19orf48Q6RUI8 117 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 B3GNT8Q7Z7M8 397 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ADGRG6Q86SQ4 1221 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 PIM3Q86V86 326 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 TRAPPC5Q8IUR0 188 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 TRIM48Q8IWZ4 208 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 NAGSQ8N159 534 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ARL14Q8N4G2 192 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 TAB3Q8N5C8 712 aaPredicted RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 AVL9Q8NBF6 648 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 PLPP7Q8NBV4 271 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 WDR36Q8NI36 951 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 SLC37A2Q8TED4 501 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 UBE2Q2Q8WVN8 375 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ATG4AQ8WYN0 398 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 FGF11Q92914 225 aa5.78□□□□□ -1.48
FOCAD-213ENST00000604254 LIN37Q96GY3 246 aaPredicted RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 AHCYL2Q96HN2 611 aaKnown RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 ZNF578Q96N58 590 aaPredicted RBP5.78□□□□□ -1.48
FOCAD-213ENST00000604254 VPS35Q96QK1 796 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms