RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ST14Q9Y5Y6 855 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 SLC30A1Q9Y6M5 507 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 CHD8Q9HCK8 2581 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 CEP295Q9C0D2 2601 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 PDZK1P1A8MUH7 402 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 HGSO14964 777 aaPredicted RBP11.38□□□□□ -0.59
CCDC12-209ENST00000604164 PPM1DO15297 605 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 BUD23O43709 281 aaKnown RBP11.38□□□□□ -0.59
CCDC12-209ENST00000604164 DUX1O43812 170 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 CEP104O60308 925 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 MTX2O75431 263 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 METTL18O95568 372 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 FGGP02679 453 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 ITGA2BP08514 1039 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 JMJD7P0C870 316 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 XRCC1P18887 633 aaPredicted RBP11.38□□□□□ -0.59
CCDC12-209ENST00000604164 ZNF140P52738 457 aaPredicted RBP11.38□□□□□ -0.59
CCDC12-209ENST00000604164 GDF10P55107 478 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 OR1D5P58170 312 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 ZFP36L1Q07352 338 aaKnown RBP11.38□□□□□ -0.59
CCDC12-209ENST00000604164 CDH17Q12864 832 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 SNX1Q13596 522 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 SPARCL1Q14515 664 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 SKIDA1Q1XH10 827 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.38□□□□□ -0.59
CCDC12-209ENST00000604164 ZNF648Q5T619 568 aaPredicted RBP11.38□□□□□ -0.59
CCDC12-209ENST00000604164 PHF19Q5T6S3 580 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 GPRC6AQ5T6X5 926 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 AGAP9Q5VTM2 703 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 DENND5AQ6IQ26 1287 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 PPP1R21Q6ZMI0 780 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 RAB11FIP2Q7L804 512 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 GSTA5Q7RTV2 222 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 SNX20Q7Z614 316 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 FBXO39Q8N4B4 442 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 BEND7Q8N7W2 519 aaPredicted RBP11.38□□□□□ -0.59
CCDC12-209ENST00000604164 ZNF248Q8NDW4 579 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 OR4D9Q8NGE8 314 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 STYXQ8WUJ0 223 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 C1orf54Q8WWF1 131 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 PBKQ96KB5 322 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 SLC46A1Q96NT5 459 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 TLR10Q9BXR5 811 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 ASB8Q9H765 288 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 VPS37BQ9H9H4 285 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 UCK1Q9HA47 277 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 CPNE7Q9UBL6 633 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 MYLKQ15746 1914 aa11.38□□□□□ -0.59
CCDC12-209ENST00000604164 MAP1BP46821 2468 aaKnown RBP11.37□□□□□ -0.59
CCDC12-209ENST00000604164 IGHV1OR21-1A0A087WYE8 117 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 HEATR9A2RTY3 570 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 A6NCN8 305 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 F8W8V4 182 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 H7C0S8 307 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 B4GAT1O43505 415 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A9O60656 530 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 SUN1O94901 812 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 TNFSF15O95150 251 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 VIPP01282 170 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A6P19224 532 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A1P22309 533 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A4P22310 534 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 CD1CP29017 333 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A3P35503 534 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A5P35504 534 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
CCDC12-209ENST00000604164 PDX1P52945 283 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 DMPKQ09013 629 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 MSLNQ13421 630 aaPredicted RBP11.37□□□□□ -0.59
CCDC12-209ENST00000604164 SEPT6Q14141 434 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 PLA2G4EQ3MJ16 856 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 BROXQ5VW32 411 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 FOXR1Q6PIV2 292 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 WDR74Q6RFH5 385 aaPredicted RBP11.37□□□□□ -0.59
CCDC12-209ENST00000604164 ABRAXAS1Q6UWZ7 409 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 NLRP9Q7RTR0 991 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 SLITRK4Q8IW52 837 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 SFTPA2Q8IWL1 248 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 RASGEF1AQ8N9B8 481 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 PATE1Q8WXA2 126 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC12-209ENST00000604164 CXorf40BQ96DE9 158 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 DCBLD2Q96PD2 775 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 TTC1Q99614 292 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 COPS8Q99627 209 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 DPH1Q9BZG8 443 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 FOXP3Q9BZS1 431 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 B3GNT4Q9C0J1 378 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 ETNK1Q9HBU6 452 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 PRDM8Q9NQV8 689 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 RAB6BQ9NRW1 208 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 POT1Q9NUX5 634 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 NLE1Q9NVX2 485 aaPredicted RBP11.37□□□□□ -0.59
CCDC12-209ENST00000604164 FKBPLQ9UIM3 349 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 TMPRSS11EQ9UL52 423 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 ATXN7L1Q9ULK2 861 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms