RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 CD68P34810 354 aaPredicted RBP20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 CLCNKAP51800 687 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 DCDC1P59894 354 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 KCNC4Q03721 635 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 CRTC3Q6UUV7 619 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 ZC3H18Q86VM9 953 aaKnown RBP20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 RCOR2Q8IZ40 523 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 TRAM1L1Q8N609 369 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 GLYATL1Q969I3 302 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 RTP4Q96DX8 246 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 QKIQ96PU8 341 aaKnown RBP eCLIP20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 PLEKHG4BQ96PX9 1271 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 CLMPQ9H6B4 373 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 PILRAQ9UKJ1 303 aa20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 TLN1Q9Y490 2541 aaKnown RBP20.91■□□□□ 0.94
PPFIA3-209ENST00000602783 RCCD1A6NED2 376 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 F5H423 210 aaPredicted RBP20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 WISP1O95388 367 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 FECHP22830 423 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 INSCQ1MX18 579 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 PLA2G4EQ3MJ16 856 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 CCDC70Q6NSX1 233 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 CEACAM20Q6UY09 585 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 AVL9Q8NBF6 648 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 SPRY4Q9C004 299 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 APMAPQ9HDC9 416 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 FBXO8Q9NRD0 319 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 SCHIP1Q9P0W5 487 aaPredicted RBP20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 KLHL8Q9P2G9 620 aaPredicted RBP20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 NFKBIL1Q9UBC1 381 aaPredicted RBP20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 SLC23A2Q9UGH3 650 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 SPO11Q9Y5K1 396 aa20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 EPN1Q9Y6I3 576 aaPredicted RBP20.9■□□□□ 0.94
PPFIA3-209ENST00000602783 GPR89AB7ZAQ6 455 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 CHUKO15111 745 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 MTSS1O43312 755 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 GPR89BP0CG08 455 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 BPIP17213 487 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 XRCC1P18887 633 aaPredicted RBP20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 UBE2IP63279 158 aaKnown RBP20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 NOMO1Q15155 1222 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 PPP2R5EQ16537 467 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 PDPK2PQ6A1A2 396 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 BORAQ6PGQ7 559 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 KDELC1Q6UW63 502 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 PLXDC1Q8IUK5 500 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 TMTC1Q8IUR5 882 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 NLGN4XQ8N0W4 816 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 NLGN4YQ8NFZ3 816 aaPredicted RBP20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 ZPBPQ9BS86 351 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 HEMGNQ9BXL5 484 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 EPB41L1Q9H4G0 881 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 GEMIN8Q9NWZ8 242 aaKnown RBP20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 FAM153AQ9UHL3 310 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 DNAJC16Q9Y2G8 782 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 MYO18BQ8IUG5 2567 aa20.89■□□□□ 0.93
PPFIA3-209ENST00000602783 ZNF106Q9H2Y7 1883 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 LILRA5A6NI73 299 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 KMOO15229 486 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 PPFIA2O75334 1257 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 MTX2O75431 263 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 IPO7O95373 1038 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 VIPP01282 170 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 ZNF7P17097 686 aaPredicted RBP20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 MAP4P27816 1152 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 CTNNA1P35221 906 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 RAD9BQ6WBX8 426 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 BBS12Q6ZW61 710 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 LRRTM4Q86VH4 590 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 ZNF567Q8N184 647 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 TRIM4Q9C037 500 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 SLC25A18Q9H1K4 315 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 GPN2Q9H9Y4 310 aaPredicted RBP20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 BPIFA1Q9NP55 256 aa20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 REXO2Q9Y3B8 237 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-209ENST00000602783 ZNF891A8MT65 544 aaPredicted RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 PDZK1P1A8MUH7 402 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 HACD1B0YJ81 288 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 AURKAO14965 403 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 POLR1CO15160 346 aaPredicted RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 CAPN5O15484 640 aaPredicted RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 CDK14O94921 469 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 SLC19A1P41440 591 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 GFERP55789 205 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 WNT3AP56704 352 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 SEPT7Q16181 437 aaKnown RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 ATG14Q6ZNE5 492 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 TMEM26Q6ZUK4 368 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 TIPARPQ7Z3E1 657 aaKnown RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 TRIM48Q8IWZ4 208 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 UNC5BQ8IZJ1 945 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 ACRBPQ8NEB7 543 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 KIAA1143Q96AT1 154 aaPredicted RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 OXNAD1Q96HP4 312 aaPredicted RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 SLC45A3Q96JT2 553 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 SRPK1Q96SB4 655 aaKnown RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 VAT1Q99536 393 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 UCK1Q9HA47 277 aa20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 ZNF624Q9P2J8 865 aaPredicted RBP20.87■□□□□ 0.93
PPFIA3-209ENST00000602783 DUSP10Q9Y6W6 482 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms