RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 ZNF514Q96K75 400 aaPredicted RBP14.18□□□□□ -0.14
UPF1-211ENST00000600868 WDR92Q96MX6 357 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 RBBP8Q99708 897 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 CLPBQ9H078 707 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 IRF2BPLQ9H1B7 796 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 OR2AG1Q9H205 316 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 KCNH6Q9H252 994 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 RHOJQ9H4E5 214 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 RMI1Q9H9A7 625 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 ATXN10Q9UBB4 475 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 ZNF180Q9UJW8 692 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 PLAAQ9Y263 795 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 CRYL1Q9Y2S2 319 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 TMEM98Q9Y2Y6 226 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 PCDHB1Q9Y5F3 818 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 NFS1Q9Y697 457 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 COMMD10Q9Y6G5 202 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 IKBKGQ9Y6K9 419 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 R4GN57 208 aa14.18□□□□□ -0.14
UPF1-211ENST00000600868 SPTY2D1-AS1A0A0U1RR47 76 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 UBA6A0AVT1 1052 aaPredicted RBP14.17□□□□□ -0.14
UPF1-211ENST00000600868 TMEM202A6NGA9 273 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 F8W8V4 182 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 H3BMM5 538 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 QSOX1O00391 747 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 CHUKO15111 745 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 VILLO15195 856 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 SGTAO43765 313 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 NUAK1O60285 661 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 ASMTLO95671 621 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 CEACAM5P06731 702 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 INHBAP08476 426 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 F7P08709 466 aaPredicted RBP14.17□□□□□ -0.14
UPF1-211ENST00000600868 ZNF8P17098 575 aaPredicted RBP14.17□□□□□ -0.14
UPF1-211ENST00000600868 GCAP28676 217 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 SPRP35270 261 aaPredicted RBP14.17□□□□□ -0.14
UPF1-211ENST00000600868 SERPINB9P50453 376 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 IFFO1Q0D2I5 559 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 CASP8Q14790 479 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 RASA2Q15283 850 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 TEAD4Q15561 434 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 TPRG1LQ5T0D9 272 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 ADGRD1Q6QNK2 874 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 TDRPQ86YL5 185 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 CLDN19Q8N6F1 224 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 DCAKDQ8WVC6 231 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 BIRC8Q96P09 236 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 TMEM109Q9BVC6 243 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 ROPN1BQ9BZX4 212 aaPredicted RBP14.17□□□□□ -0.14
UPF1-211ENST00000600868 ROPN1Q9HAT0 212 aaPredicted RBP14.17□□□□□ -0.14
UPF1-211ENST00000600868 TMEM74BQ9NUR3 256 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 GNPTGQ9UJJ9 305 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 GPR34Q9UPC5 381 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 GON4LQ3T8J9 2241 aa14.17□□□□□ -0.14
UPF1-211ENST00000600868 DYNC1I1O14576 645 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 DNAJC6O75061 913 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 FAM155BO75949 473 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 OR56A5P0C7T3 313 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 PKMP14618 531 aaKnown RBP14.16□□□□□ -0.14
UPF1-211ENST00000600868 CNTFP26441 200 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 FMO4P31512 558 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 POLD2P49005 469 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 CSNK1EP49674 416 aaKnown RBP14.16□□□□□ -0.14
UPF1-211ENST00000600868 CTSCP53634 463 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 LIMK2P53671 638 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 NXPH1P58417 271 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 BCL7AQ4VC05 210 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 CTSL3PQ5NE16 218 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 ZNF549Q6P9A3 640 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 DOK6Q6PKX4 331 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 TMEM220Q6QAJ8 160 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 ENPP7Q6UWV6 458 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 LRIG3Q6UXM1 1119 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 HDXQ7Z353 690 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 RABEPKQ7Z6M1 372 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 OR56A4Q8NGH8 313 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 OR2W6PQ8NHA6 318 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 CEP76Q8TAP6 659 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 PIGKQ92643 395 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 MRRFQ96E11 262 aaKnown RBP14.16□□□□□ -0.14
UPF1-211ENST00000600868 SGF29Q96ES7 293 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 VPS39Q96JC1 886 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 ZIM3Q96PE6 472 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 AARSD1Q9BTE6 412 aaKnown RBP14.16□□□□□ -0.14
UPF1-211ENST00000600868 CCDC68Q9H2F9 335 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 PSMC3IPQ9P2W1 217 aaPredicted RBP14.16□□□□□ -0.14
UPF1-211ENST00000600868 RAB23Q9ULC3 237 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 PCDHGA5Q9Y5G8 931 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 PRSS21Q9Y6M0 314 aa14.16□□□□□ -0.14
UPF1-211ENST00000600868 ATXN2Q99700 1313 aaKnown RBP14.15□□□□□ -0.14
UPF1-211ENST00000600868 PRSS38A1L453 326 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 RASGRF2O14827 1237 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 CDH16O75309 829 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 KRT38O76015 456 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 EPN2O95208 641 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 FUCA1P04066 466 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 ITGA2BP08514 1039 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 CD9P21926 228 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 PRLHRP49683 370 aa14.15□□□□□ -0.14
UPF1-211ENST00000600868 C21orf59P57076 290 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms