RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 TRIB3Q96RU7 358 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CDK5RAP1Q96SZ6 601 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 ELAC1Q9H777 363 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SUN2Q9UH99 717 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 AP4B1Q9Y6B7 739 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CTSOP43234 321 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 HTR6P50406 440 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 UFM1P61960 85 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 ARHGEF7Q14155 803 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SLC44A4Q53GD3 710 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 RALGPS2Q86X27 583 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 FUNDC1Q8IVP5 155 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CPSF7Q8N684 471 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 PXYLP1Q8TE99 480 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SLC22A17Q8WUG5 538 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 MRPS31Q92665 395 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 TEX37Q96LM6 180 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 NSUN3Q9H649 340 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SLAMF8Q9P0V8 285 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CHD7Q9P2D1 2997 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 C15orf38-AP3S2A0A0A6YYH1 394 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CCL16O15467 120 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 KERAO60938 352 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SLC25A14O95258 325 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 EPOP01588 193 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CAPN1P07384 714 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 OGNP20774 298 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 TPP2P29144 1249 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 HMOX2P30519 316 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 VEGFBP49765 207 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 MAPK10P53779 464 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 KCNK10P57789 538 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 TRIM25Q14258 630 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 TLR1Q15399 786 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 ARPINQ7Z6K5 226 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 DHFR2Q86XF0 187 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZNF366Q8N895 744 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 CANT1Q8WVQ1 401 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 SPATA16Q9BXB7 569 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZDHHC6Q9H6R6 413 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZFYVE1Q9HBF4 777 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 PREBQ9HCU5 417 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 MRPL17Q9NRX2 175 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 GALNT8Q9NY28 637 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 LSM7Q9UK45 103 aaKnown RBP11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 USP22Q9UPT9 525 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
ARHGEF1-220ENST00000600274 KLHL33A6NCF5 533 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 TTC36A6NLP5 189 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 SYCE1LA8MT33 242 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 PDLIM1O00151 329 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 TEX28O15482 410 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 TBC1D4O60343 1298 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 LRG1P02750 347 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 CSF2RAP15509 400 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 CA5AP35218 305 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 PLOD1Q02809 727 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 CTSL3PQ5NE16 218 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 KRT80Q6KB66 452 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 RFLNAQ6ZTI6 216 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 LARP4Q71RC2 724 aaKnown RBP eCLIP11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 MILR1Q7Z6M3 343 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 KIAA1191Q96A73 305 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 PLD4Q96BZ4 506 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 PPM1MQ96MI6 270 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 ZNF599Q96NL3 588 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 LIN28AQ9H9Z2 209 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 WWOXQ9NZC7 414 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 MED16Q9Y2X0 877 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 INSL5Q9Y5Q6 135 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 DOCK6Q96HP0 2047 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 NLRC5Q86WI3 1866 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 HK3P52790 923 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 HSPA14Q0VDF9 509 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 ADGRE1Q14246 886 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 GPRIN3Q6ZVF9 776 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 PELI3Q8N2H9 469 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 GATA6Q92908 595 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 MAELQ96JY0 434 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 BIRC8Q96P09 236 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 TRMOQ9BU70 441 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 TFB2MQ9H5Q4 396 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 ABCB8Q9NUT2 735 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 RNF103-CHMP3A0A140T963 221 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 A0A1W2PQ67 120 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 LCHNA4D1U4 455 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 PRMT5O14744 637 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 CD70P32970 193 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 HK2P52789 917 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 DGKQP52824 942 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 NKX3-2P78367 333 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 HMGCS1Q01581 520 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 SMARCB1Q12824 385 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 BOP1Q14137 746 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 TGFBIQ15582 683 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 TBCELQ5QJ74 424 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 NKAPQ8N5F7 415 aaKnown RBP11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 LKAAEAR1Q8TD35 194 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 CD200R1Q8TD46 325 aa11.41□□□□□ -0.58
ARHGEF1-220ENST00000600274 ULK4Q96C45 1275 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms