RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 CRTC3Q6UUV7 619 aa21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 KCNMB4Q86W47 210 aa21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 KIAA2013Q8IYS2 634 aa21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 UNC5BQ8IZJ1 945 aa21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 RASGEF1AQ8N9B8 481 aa21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 LMX1AQ8TE12 382 aa21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 OR2M4Q96R27 311 aa21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 RRAGDQ9NQL2 400 aaPredicted RBP21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 TM7SF3Q9NS93 570 aa21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 EP300Q09472 2414 aaPredicted RBP21.85■■□□□ 1.09
CHMP2A-204ENST00000597848 ADAMTS9Q9P2N4 1935 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 GPR89AB7ZAQ6 455 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 CDX4O14627 284 aaPredicted RBP21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 GDF9O60383 454 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 DNAJC6O75061 913 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 NDUFS3O75489 264 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 GPR89BP0CG08 455 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 ERVK-10P10266 1014 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 TTPAP49638 278 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 ITIH4Q14624 930 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 PYCR3Q53H96 274 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 HSP90AA5PQ58FG0 334 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 TMEM220Q6QAJ8 160 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 TRAPPC5Q8IUR0 188 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 GPR150Q8NGU9 434 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 GABPB2Q8TAK5 448 aaPredicted RBP21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 GSDMBQ8TAX9 411 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 CALML6Q8TD86 181 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 SGF29Q96ES7 293 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 SCARF2Q96GP6 870 aaPredicted RBP21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 BOCQ9BWV1 1114 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 TMEM168Q9H0V1 697 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 ANKZF1Q9H8Y5 726 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 PLAC1Q9HBJ0 212 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 IARS2Q9NSE4 1012 aaKnown RBP21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 DNAAF2Q9NVR5 837 aaKnown RBP21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 PCDH15Q96QU1 1955 aa21.84■■□□□ 1.09
CHMP2A-204ENST00000597848 ZNF106Q9H2Y7 1883 aaKnown RBP21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 OR2AG2A6NM03 316 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 C4orf47A7E2U8 309 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 PFDN6O15212 129 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 PIAS2O75928 621 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 ATP1B2P14415 290 aaPredicted RBP21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 EPHA8P29322 1005 aaPredicted RBP21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 SSTR1P30872 391 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 CTSCP53634 463 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 B4GALNT1Q00973 533 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 ZNF470Q6ECI4 717 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 CHST15Q7LFX5 561 aaPredicted RBP21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 LRRTM4Q86VH4 590 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 GATAD2AQ86YP4 633 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 NAT14Q8WUY8 206 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 CCDC97Q96F63 343 aaPredicted RBP21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 CERS2Q96G23 380 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 FAM167BQ9BTA0 163 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 UCKL1Q9NWZ5 548 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 VPS13AQ96RL7 3174 aa21.83■■□□□ 1.09
CHMP2A-204ENST00000597848 IGLV3-16A0A075B6K0 115 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 CHUKO15111 745 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 KMOO15229 486 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 AQP9O43315 295 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 OR1I1O60431 355 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 ZNF7P17097 686 aaPredicted RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 OGNP20774 298 aaKnown RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 DGKAP23743 735 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 NSG1P42857 185 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 SUZ12Q15022 739 aaKnown RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 ELOCQ15369 112 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 ERCC6LQ2NKX8 1250 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 TRMT10BQ6PF06 316 aaKnown RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 C3orf62Q6ZUJ4 267 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 LMNTD2Q8IXW0 634 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 FSTL5Q8N475 847 aaPredicted RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 ZNF548Q8NEK5 533 aaPredicted RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 SAP25Q8TEE9 199 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 ZNF514Q96K75 400 aaPredicted RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 TCF12Q99081 682 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 LRRC61Q9BV99 259 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 VPS37BQ9H9H4 285 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 TRNAU1APQ9NX07 287 aaKnown RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 DOLKQ9UPQ8 538 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 PLEKHM1Q9Y4G2 1056 aa21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 PCYT1BQ9Y5K3 369 aaPredicted RBP21.82■■□□□ 1.08
CHMP2A-204ENST00000597848 GSTA2P09210 222 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 ZNF883P0CG24 379 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 ACP5P13686 325 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 ILF3Q12906 894 aaKnown RBP eCLIP21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 CTBP1Q13363 440 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 PLA2G4EQ3MJ16 856 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 STPG1Q5TH74 334 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 TAF8Q7Z7C8 310 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 CILP2Q8IUL8 1156 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 DENND6AQ8IWF6 608 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 GSPT2Q8IYD1 628 aaKnown RBP21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 CLDN19Q8N6F1 224 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 GSDMCQ9BYG8 508 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 CLPBQ9H078 707 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 GPR34Q9UPC5 381 aa21.81■■□□□ 1.08
CHMP2A-204ENST00000597848 UBA6A0AVT1 1052 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms