RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 SNX7Q9UNH6 387 aa9.96□□□□□ -0.82
TRIM28-210ENST00000597618 ENTPD4Q9Y227 616 aa9.96□□□□□ -0.82
TRIM28-210ENST00000597618 SIK3Q9Y2K2 1263 aa9.96□□□□□ -0.82
TRIM28-210ENST00000597618 ADGRG1Q9Y653 693 aa9.96□□□□□ -0.82
TRIM28-210ENST00000597618 IGHV5-51A0A0C4DH38 117 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 C1orf232A0A0U1RR37 186 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 ARHGAP10A1A4S6 786 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 RGSL1A5PLK6 1076 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 ZNF185O15231 689 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 SCRG1O75711 98 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 RNF8O76064 485 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 CLDN7O95471 211 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 PRF1P14222 555 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 FOLR1P15328 257 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 ZNF8P17098 575 aaPredicted RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 EEF1GP26641 437 aaKnown RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 MIPP30301 263 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 SERPINB6P35237 376 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 SPINT3P49223 89 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 ARL4DP49703 201 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 VAV2P52735 878 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 RRADP55042 308 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 RPL26P61254 145 aaKnown RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 GPR18Q14330 331 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 KCNAB1Q14722 419 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 SEPT7Q16181 437 aaKnown RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 CAMK4Q16566 473 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 TDRD12Q587J7 1177 aaKnown RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 TCP11X2Q5H9J9 407 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 VWA5B1Q5TIE3 1220 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 ZNF517Q6ZMY9 492 aaPredicted RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 CYP4V2Q6ZWL3 525 aaPredicted RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 MED25Q71SY5 747 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 KMT5CQ86Y97 462 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 MCOLN2Q8IZK6 566 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 ARFGAP1Q8N6T3 406 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 GLIS1Q8NBF1 620 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 CXorf40BQ96DE9 158 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 ZNF514Q96K75 400 aaPredicted RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 WDR24Q96S15 920 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 LYSMD1Q96S90 227 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 TIMM29Q9BSF4 260 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 TDRD1Q9BXT4 1180 aaKnown RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 OR2AG1Q9H205 316 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 SLC40A1Q9NP59 571 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 NT5MQ9NPB1 228 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 FGF21Q9NSA1 209 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 PKD2L2Q9NZM6 624 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 TMEM63CQ9P1W3 806 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 C5AR2Q9P296 337 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 RPL26L1Q9UNX3 145 aaKnown RBP9.95□□□□□ -0.82
TRIM28-210ENST00000597618 B3GNT3Q9Y2A9 372 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 CCDC168Q8NDH2 2452 aa9.95□□□□□ -0.82
TRIM28-210ENST00000597618 AKAP9Q99996 3911 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 HIVEP1P15822 2718 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 A6NL46 340 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 OR52A4PA6NMU1 304 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 CHUKO15111 745 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 EPHB6O15197 1021 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 KMOO15229 486 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 GADD45BO75293 160 aaPredicted RBP9.94□□□□□ -0.82
TRIM28-210ENST00000597618 JCHAINP01591 159 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 KLK3P07288 261 aaPredicted RBP9.94□□□□□ -0.82
TRIM28-210ENST00000597618 RAB40ALP0C0E4 278 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 EBLN1P0CF75 366 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 ATP1A3P13637 1013 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 CES1P23141 567 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 ARL4AP40617 200 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 KLK7P49862 253 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 PER3P56645 1201 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 GSDMDP57764 484 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 TUBB4BP68371 445 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 CDK18Q07002 472 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 ITKQ08881 620 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 GPS2Q13227 327 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 MAMLD1Q13495 774 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 TUBB2AQ13885 445 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 PLA2G4EQ3MJ16 856 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 PLEKHN1Q494U1 663 aaPredicted RBP9.94□□□□□ -0.82
TRIM28-210ENST00000597618 ANKRD20A8PQ5CZ79 823 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 ZNF569Q5MCW4 686 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 AGAP9Q5VTM2 703 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 ACAD10Q6JQN1 1059 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 PPP1R2P3Q6NXS1 205 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 KLHL35Q6PF15 583 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 CRTC3Q6UUV7 619 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 ABRAXAS1Q6UWZ7 409 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 WASH2PQ6VEQ5 465 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 TMEM126BQ8IUX1 230 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 CISD2Q8N5K1 135 aaKnown RBP9.94□□□□□ -0.82
TRIM28-210ENST00000597618 TEX26Q8N6G2 289 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 ENDOVQ8N8Q3 282 aaKnown RBP9.94□□□□□ -0.82
TRIM28-210ENST00000597618 LPCAT1Q8NF37 534 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 OR8K5Q8NH50 307 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 CCHCR1Q8TD31 782 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 PCMTD1Q96MG8 357 aaPredicted RBP9.94□□□□□ -0.82
TRIM28-210ENST00000597618 LRFN5Q96NI6 719 aa9.94□□□□□ -0.82
TRIM28-210ENST00000597618 CD180Q99467 661 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms