RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 OR52A4PA6NMU1 304 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 PDZK1P1A8MUH7 402 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 C21orf140B9A014 251 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 KMOO15229 486 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 VPS4BO75351 444 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 MTA2O94776 668 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 RNF224P0DH78 156 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 ZNF7P17097 686 aaPredicted RBP9.8□□□□□ -0.84
LIG1-209ENST00000596104 NELFEP18615 380 aaKnown RBP9.8□□□□□ -0.84
LIG1-209ENST00000596104 CD86P42081 329 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 GBE1Q04446 702 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 SLC10A2Q12908 348 aaPredicted RBP9.8□□□□□ -0.84
LIG1-209ENST00000596104 LAMB3Q13751 1172 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 GPR18Q14330 331 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 INSCQ1MX18 579 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 PLA2G4EQ3MJ16 856 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 KHDC1Q4VXA5 237 aaKnown RBP9.8□□□□□ -0.84
LIG1-209ENST00000596104 TDRD12Q587J7 1177 aaKnown RBP9.8□□□□□ -0.84
LIG1-209ENST00000596104 AGAP9Q5VTM2 703 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 CACHD1Q5VU97 1274 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 ALS2CLQ60I27 953 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 HGSNATQ68CP4 663 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 FAM92BQ6ZTR7 304 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 TMC3Q7Z5M5 1100 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 C11orf96Q7Z7L8 435 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 LRRTM4Q86VH4 590 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 PPP1R3BQ86XI6 285 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 CPNE8Q86YQ8 564 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 TRIM48Q8IWZ4 208 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 TRAM1L1Q8N609 369 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 PQLC3Q8N755 202 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 GLYATL1Q969I3 302 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 FAF2Q96CS3 445 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 HDAC11Q96DB2 347 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 SLC41A2Q96JW4 573 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 TRIB3Q96RU7 358 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 RUFY1Q96T51 708 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 ZNF670Q9BS34 389 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 TIMM29Q9BSF4 260 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 ZSCAN5AQ9BUG6 496 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 NUP85Q9BW27 656 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 SPATA16Q9BXB7 569 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 RAB33BQ9H082 229 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 ACTL8Q9H568 366 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 AKIRIN1Q9H9L7 192 aaPredicted RBP9.8□□□□□ -0.84
LIG1-209ENST00000596104 ZFYVE1Q9HBF4 777 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 MLXIPLQ9NP71 852 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 HAUS2Q9NVX0 235 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 VPS4AQ9UN37 437 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 DNAJC16Q9Y2G8 782 aa9.8□□□□□ -0.84
LIG1-209ENST00000596104 SPENQ96T58 3664 aaKnown RBP9.8□□□□□ -0.84
LIG1-209ENST00000596104 UTP20O75691 2785 aaKnown RBP9.79□□□□□ -0.84
LIG1-209ENST00000596104 ICE1Q9Y2F5 2266 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 IGHV5-51A0A0C4DH38 117 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 TTLL8A6PVC2 850 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 KCNK1O00180 336 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 VEGFDO43915 354 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 MTX2O75431 263 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 SORBS2O94875 1100 aaKnown RBP9.79□□□□□ -0.84
LIG1-209ENST00000596104 AGFG2O95081 481 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 JCHAINP01591 159 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 MT-ND3P03897 115 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 CYP1A2P05177 515 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 CCNYL3P0C7X3 344 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 PIRTP0C851 137 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 FOLR1P15328 257 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 MX2P20592 715 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 RPL10P27635 214 aaKnown RBP9.79□□□□□ -0.84
LIG1-209ENST00000596104 CASP14P31944 242 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 PPP1CAP62136 330 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 IFI35P80217 286 aaPredicted RBP9.79□□□□□ -0.84
LIG1-209ENST00000596104 ZBTB17Q13105 803 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 GALNT3Q14435 633 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 SEPT7Q16181 437 aaKnown RBP9.79□□□□□ -0.84
LIG1-209ENST00000596104 UGT8Q16880 541 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 FHL5Q5TD97 284 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 CPZQ66K79 652 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 PDPK2PQ6A1A2 396 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 PWWP2BQ6NUJ5 590 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 RBM12BQ8IXT5 1001 aaKnown RBP9.79□□□□□ -0.84
LIG1-209ENST00000596104 EFCAB3Q8N7B9 438 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 CPT1CQ8TCG5 803 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 ZDHHC12Q96GR4 267 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 FCRL4Q96PJ5 515 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 ADGRE3Q9BY15 652 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 MAGEE1Q9HCI5 957 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 TMPRSS11EQ9UL52 423 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 SHOC2Q9UQ13 582 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 WDR37Q9Y2I8 494 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 MAP4K5Q9Y4K4 846 aa9.79□□□□□ -0.84
LIG1-209ENST00000596104 PCDHGA9Q9Y5G4 932 aaKnown RBP9.79□□□□□ -0.84
LIG1-209ENST00000596104 MYO1FO00160 1098 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 SEMA7AO75326 666 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 CDK14O94921 469 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 BPIP17213 487 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 PTPN4P29074 926 aa9.78□□□□□ -0.84
LIG1-209ENST00000596104 SSR1P43307 286 aaKnown RBP9.78□□□□□ -0.84
LIG1-209ENST00000596104 DRG2P55039 364 aaKnown RBP9.78□□□□□ -0.84
LIG1-209ENST00000596104 RPS18P62269 152 aaKnown RBP9.78□□□□□ -0.84
LIG1-209ENST00000596104 TUBB3Q13509 450 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms