RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 OR10T2Q8NGX3 314 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 SNX19Q92543 992 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 VPS33AQ96AX1 596 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 TEX37Q96LM6 180 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 GLT1D1Q96MS3 346 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 UROC1Q96N76 676 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 MUS81Q96NY9 551 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 BCL7BQ9BQE9 202 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 FEM1AQ9BSK4 669 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 POLR1EQ9GZS1 481 aaKnown RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 NMUR1Q9HB89 426 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 FANCEQ9HB96 536 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 SEMA4BQ9NPR2 832 aaPredicted RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 COMMD8Q9NX08 183 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 USE1Q9NZ43 259 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 PCTPQ9UKL6 214 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 ERGIC3Q9Y282 383 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 Q9Y3F1 56 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 ZNF711Q9Y462 761 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 CFAP99D6REC4 459 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 RHOBTB1O94844 696 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 HOXB6P17509 224 aaKnown RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 CRHBPP24387 322 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 SHMT2P34897 504 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 POLR2IP36954 125 aaKnown RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 AFF1P51825 1210 aaKnown RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 OR4D2P58180 307 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 YBEYP58557 167 aaPredicted RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 TRAF2Q12933 501 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 SETMARQ53H47 684 aaPredicted RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 TFAP2DQ7Z6R9 452 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 MON1AQ86VX9 555 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 SPATA2LQ8IUW3 424 aaPredicted RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 C8orf59Q8N0T1 100 aaPredicted RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 TTC30BQ8N4P2 665 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 PNPLA1Q8N8W4 532 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 ATP6V0D2Q8N8Y2 350 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 OR52E4Q8NGH9 312 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 POP5Q969H6 163 aaKnown RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 PSMG2Q969U7 264 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 FUBP1Q96AE4 644 aaKnown RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 RNF145Q96MT1 663 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 ZNF382Q96SR6 550 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 ING2Q9H160 280 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 NLE1Q9NVX2 485 aaPredicted RBP13.12□□□□□ -0.31
VRK3-209ENST00000594948 BLOC1S6Q9UL45 172 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 ST3GAL5Q9UNP4 418 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 SCML2Q9UQR0 700 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
VRK3-209ENST00000594948 A0A1W2PQH9 124 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 COQ9O75208 318 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 SERPINB7O75635 380 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 GGT1P19440 569 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 GRIK1P39086 918 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 TBX4P57082 545 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 GSTM4Q03013 218 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 CHRNB3Q05901 458 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 SERINC3Q13530 473 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 PLCL1Q15111 1095 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 RGS21Q2M5E4 152 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 MS4A13Q5J8X5 152 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 C6orf136Q5SQH8 315 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 PAQR3Q6TCH7 311 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 AFTPHQ6ULP2 937 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 DLEU7Q6UYE1 221 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 ZC3H7AQ8IWR0 971 aaKnown RBP13.11□□□□□ -0.31
VRK3-209ENST00000594948 SVOPLQ8N434 492 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 PJA1Q8NG27 643 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 OR8J3Q8NGG0 315 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 TMBIM1Q969X1 311 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 CDKN2AIPNLQ96HQ2 116 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 TMEM74Q96NL1 305 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 SEPHS2Q99611 448 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 SEMA3CQ99985 751 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 MTG1Q9BT17 334 aaPredicted RBP13.11□□□□□ -0.31
VRK3-209ENST00000594948 GORASP2Q9H8Y8 452 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 INTS7Q9NVH2 962 aaKnown RBP13.11□□□□□ -0.31
VRK3-209ENST00000594948 GIN1Q9NXP7 522 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 WDR37Q9Y2I8 494 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 AP3M1Q9Y2T2 418 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 GOLGB1Q14789 3259 aaKnown RBP13.11□□□□□ -0.31
VRK3-209ENST00000594948 A0A1B0GTL3 188 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 BOLA2-SMG1P6H3BVE0 249 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 FOXD2O60548 495 aaPredicted RBP13.11□□□□□ -0.31
VRK3-209ENST00000594948 ZNF623O75123 536 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 NDST3O95803 873 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 ZNF182P17025 639 aaPredicted RBP13.11□□□□□ -0.31
VRK3-209ENST00000594948 EEF1B2P24534 225 aaKnown RBP13.11□□□□□ -0.31
VRK3-209ENST00000594948 ELK4P28324 431 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 IL12AP29459 219 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 YAP1P46937 504 aaKnown RBP13.11□□□□□ -0.31
VRK3-209ENST00000594948 MAPKAPK2P49137 400 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 PGFP49763 221 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 PWP1Q13610 501 aa13.11□□□□□ -0.31
VRK3-209ENST00000594948 NR1D2Q14995 579 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms