RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SRSF6Q13247 344 aaKnown RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 PIGHQ14442 188 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 DPYSL2Q16555 572 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 CCDC122Q5T0U0 273 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 TIGD7Q6NT04 549 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 DOK6Q6PKX4 331 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 WDR74Q6RFH5 385 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 ARHGAP36Q6ZRI8 547 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 Q6ZVL8 140 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 TMPRSS9Q7Z410 1059 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 KDELC2Q7Z4H8 507 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 HSD11B1LQ7Z5J1 315 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 SLC9B2Q86UD5 537 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 TMEM139Q8IV31 216 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 NLGN4XQ8N0W4 816 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 NAGSQ8N159 534 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 CBARPQ8N350 705 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 NPWQ8N729 165 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 NLGN4YQ8NFZ3 816 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 ZNF564Q8TBZ8 553 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 JPH3Q8WXH2 748 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 ZNF653Q96CK0 615 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 FRMD6Q96NE9 622 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 MCCC1Q96RQ3 725 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 PEBP4Q96S96 227 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 SLC12A9Q9BXP2 914 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 POLR1EQ9GZS1 481 aaKnown RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 RMI1Q9H9A7 625 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 GPN2Q9H9Y4 310 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 UVRAGQ9P2Y5 699 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 ANAPC2Q9UJX6 822 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 PPIL1Q9Y3C6 166 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 PCDHA13Q9Y5I0 950 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 BOD1L1Q8NFC6 3051 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 MYO18BQ8IUG5 2567 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 NPIPB15A6NHN6 443 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-226ENST00000591534 OR5K4A6NMS3 321 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 PPM1DO15297 605 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 PJA2O43164 708 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 MAFKO60675 156 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 LRCH4O75427 683 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 ASMTLO95671 621 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 TMEM253P0C7T8 217 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 LIFP15018 202 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 POLD2P49005 469 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 NAP1L1P55209 391 aaKnown RBP9.35□□□□□ -0.91
BRCA1-226ENST00000591534 RPL26P61254 145 aaKnown RBP9.35□□□□□ -0.91
BRCA1-226ENST00000591534 HHEXQ03014 270 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 TLE1Q04724 770 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 KRT81Q14533 505 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 CLCA4Q14CN2 919 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 PYCR3Q53H96 274 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 CYB5D1Q6P9G0 228 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 CYP4V2Q6ZWL3 525 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-226ENST00000591534 POLNQ7Z5Q5 900 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 TECPR1Q7Z6L1 1165 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 CPNE8Q86YQ8 564 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 SFTPA2Q8IWL1 248 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 SFRP1Q8N474 314 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 CCHCR1Q8TD31 782 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 TEKT4Q8WW24 435 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 APOBEC4Q8WW27 367 aaKnown RBP9.35□□□□□ -0.91
BRCA1-226ENST00000591534 HSPH1Q92598 858 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 SLC45A3Q96JT2 553 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 CSPG4P5Q96PW8 444 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 HERPUD2Q9BSE4 406 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 KCNF1Q9H3M0 494 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 FBXO8Q9NRD0 319 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.35□□□□□ -0.91
BRCA1-226ENST00000591534 VPS18Q9P253 973 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 PDP2Q9P2J9 529 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 RCOR3Q9P2K3 495 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-226ENST00000591534 AMACRQ9UHK6 382 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 ZNHIT2Q9UHR6 403 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 RPL26L1Q9UNX3 145 aaKnown RBP9.35□□□□□ -0.91
BRCA1-226ENST00000591534 B3GALT1Q9Y5Z6 326 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 ANKRD36A6QL64 1941 aa9.35□□□□□ -0.91
BRCA1-226ENST00000591534 COL27A1Q8IZC6 1860 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-226ENST00000591534 A0A087X0T9 212 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 KIR2DS5A0A0G2JLQ3 304 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 A0A0G2JNG1 304 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 RGSL1A5PLK6 1076 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 KIR2DS3K7RE56 304 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 POLR1CO15160 346 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-226ENST00000591534 FUCA1P04066 466 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 FAM228BP0C875 321 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 CTPS1P17812 591 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 LHCGRP22888 699 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 AMPD1P23109 780 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 ARHGAP25P42331 645 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 ETF1P62495 437 aaKnown RBP9.34□□□□□ -0.91
BRCA1-226ENST00000591534 NFKB2Q00653 900 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 MC2RQ01718 297 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 ABHD18Q0P651 414 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 TRAF2Q12933 501 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 KIR2DS5Q14953 304 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 TCEAL1Q15170 157 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 HADHQ16836 314 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms