RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 A0A1W2PQM1 296 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 A6NCN8 305 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 D6RAR5 112 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 TAF4O00268 1085 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 PPM1DO15297 605 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 ZW10O43264 779 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 B4GAT1O43505 415 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 SUN1O94901 812 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 GAS8O95995 478 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 APRTP07741 180 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 F3P13726 295 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF7P17097 686 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-223ENST00000591239 MSNP26038 577 aaKnown RBP9.06□□□□□ -0.96
DNMT1-223ENST00000591239 GPR3P46089 330 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 FASLGP48023 281 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 CLCNKAP51800 687 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 PDX1P52945 283 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 OR1D5P58170 312 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 B4GALNT1Q00973 533 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 CDH17Q12864 832 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 SEMA5AQ13591 1074 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 GTF2H3Q13889 308 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 SEPT6Q14141 434 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 NR1D2Q14995 579 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 PLA2G4EQ3MJ16 856 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 C4orf22Q6V702 233 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 PPP1R21Q6ZMI0 780 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 C11orf96Q7Z7L8 435 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 PROSER1Q86XN7 944 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 SFRP1Q8N474 314 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 RASGEF1AQ8N9B8 481 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 OR52K1Q8NGK4 314 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 STYXQ8WUJ0 223 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 GRAMD1AQ96CP6 724 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 ATXN7L3BQ96GX2 97 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 DNAJC1Q96KC8 554 aaKnown RBP9.06□□□□□ -0.96
DNMT1-223ENST00000591239 OSBPL9Q96SU4 736 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 NAP1L3Q99457 506 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-223ENST00000591239 TIMM29Q9BSF4 260 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 PRDM8Q9NQV8 689 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 NLE1Q9NVX2 485 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-223ENST00000591239 ATXN7L1Q9ULK2 861 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-223ENST00000591239 TTC7AQ9ULT0 858 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-223ENST00000591239 DNAJC16Q9Y2G8 782 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 ENTPD2Q9Y5L3 495 aa9.06□□□□□ -0.96
DNMT1-223ENST00000591239 UNC13CQ8NB66 2214 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 ITPR1Q14643 2758 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 COL27A1Q8IZC6 1860 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-223ENST00000591239 KIR2DS5A0A0G2JLQ3 304 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 A0A0G2JNG1 304 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 MROH6A6NGR9 719 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 PRR19A6NJB7 356 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 OR2AG2A6NM03 316 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 OR5K4A6NMS3 321 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 SRRM3A6NNA2 597 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-223ENST00000591239 USP27XA6NNY8 438 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 AGAP14A8MT82 685 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 H7C0S8 307 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 KIR2DS3K7RE56 304 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 CCL22O00626 93 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 MPOP05164 745 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 SLC2A4P14672 509 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 VCLP18206 1134 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 MSH3P20585 1137 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 AKT1P31749 480 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 GRIA1P42261 906 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 CTSCP53634 463 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 HHEXQ03014 270 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 KIR2DS5Q14953 304 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 SKIDA1Q1XH10 827 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 AMZ1Q400G9 498 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 CCDC38Q502W7 563 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 TMEM220Q6QAJ8 160 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 SNX20Q7Z614 316 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 B3GNT8Q7Z7M8 397 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 PIM3Q86V86 326 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 AMZ2Q86W34 360 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 NXPE1Q8N323 547 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 COG1Q8WTW3 980 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 MAGOHBQ96A72 148 aaKnown RBP9.05□□□□□ -0.96
DNMT1-223ENST00000591239 ULK4Q96C45 1275 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 SGF29Q96ES7 293 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 CDKN2AIPNLQ96HQ2 116 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF514Q96K75 400 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-223ENST00000591239 AP1M1Q9BXS5 423 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 FOXP3Q9BZS1 431 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 FAM96AQ9H5X1 160 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 POLR1BQ9H9Y6 1135 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 CASS4Q9NQ75 786 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 CRLS1Q9UJA2 301 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 PYCARDQ9ULZ3 195 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 SNX12Q9UMY4 172 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 DNMT3AQ9Y6K1 912 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-223ENST00000591239 SLC30A1Q9Y6M5 507 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 APC2O95996 2303 aa9.05□□□□□ -0.96
DNMT1-223ENST00000591239 ZNF106Q9H2Y7 1883 aaKnown RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 ACACAQ13085 2346 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 IGHV1OR21-1A0A087WYE8 117 aa9.04□□□□□ -0.96
DNMT1-223ENST00000591239 A0A1W2PNU3 283 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-223ENST00000591239 CCDC78A2IDD5 438 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms