RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 KLK13Q9UKR3 277 aa11.74□□□□□ -0.53
LIG3-213ENST00000590630 KCNK6Q9Y257 313 aa11.74□□□□□ -0.53
LIG3-213ENST00000590630 TCAF1Q9Y4C2 921 aa11.74□□□□□ -0.53
LIG3-213ENST00000590630 PLEKHM1Q9Y4G2 1056 aa11.74□□□□□ -0.53
LIG3-213ENST00000590630 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
LIG3-213ENST00000590630 IGF2RP11717 2491 aa11.74□□□□□ -0.53
LIG3-213ENST00000590630 TRBV5-4A0A0C4DH59 114 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 KLHL33A6NCF5 533 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 CFAP99D6REC4 459 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 CCL22O00626 93 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 KCNJ13O60928 360 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 SLC2A4P14672 509 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 ZNF7P17097 686 aaPredicted RBP11.73□□□□□ -0.53
LIG3-213ENST00000590630 VCLP18206 1134 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 SPINK2P20155 84 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 MSH3P20585 1137 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 CA5AP35218 305 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 NPY2RP49146 381 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 ACVR1Q04771 509 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 CACNG1Q06432 222 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 PPP1R7Q15435 360 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 INSCQ1MX18 579 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 PCID2Q5JVF3 399 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 PERM1Q5SV97 790 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 TSTD2Q5T7W7 516 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 LRRC8BQ6P9F7 803 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 CCNI2Q6ZMN8 369 aaPredicted RBP11.73□□□□□ -0.53
LIG3-213ENST00000590630 NAGSQ8N159 534 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 RASGEF1AQ8N9B8 481 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 OR13J1Q8NGT2 312 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 CCDC74AQ96AQ1 378 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 DCUN1D1Q96GG9 259 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 COPS8Q99627 209 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 CCDC3Q9BQI4 270 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 DDX47Q9H0S4 455 aaKnown RBP11.73□□□□□ -0.53
LIG3-213ENST00000590630 KLC4Q9NSK0 619 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 TBC1D29Q9UFV1 150 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 CLCA2Q9UQC9 943 aa11.73□□□□□ -0.53
LIG3-213ENST00000590630 DNMT3AQ9Y6K1 912 aaPredicted RBP11.73□□□□□ -0.53
LIG3-213ENST00000590630 IGLV3-16A0A075B6K0 115 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 TCRBV7S3A2A0A539 114 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 CCDC78A2IDD5 438 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 A6NCN8 305 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 PRR19A6NJB7 356 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 OR5K4A6NMS3 321 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 CCDC188H7C350 402 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 ZW10O43264 779 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 TCEA3O75764 348 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 MLNP12872 115 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 F3P13726 295 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 JUPP14923 745 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 ACRV1P26436 265 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 CASQ1P31415 396 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 FASLGP48023 281 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 ARSDP51689 593 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 SESN2P58004 480 aaPredicted RBP11.72□□□□□ -0.53
LIG3-213ENST00000590630 PLA2G4EQ3MJ16 856 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 ZRANB3Q5FWF4 1079 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 CDCP2Q5VXM1 449 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 AFTPHQ6ULP2 937 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 SYDE1Q6ZW31 735 aaPredicted RBP11.72□□□□□ -0.53
LIG3-213ENST00000590630 ZNF534Q76KX8 674 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 ZNF438Q7Z4V0 828 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 C11orf96Q7Z7L8 435 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 AMZ2Q86W34 360 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 SFTPA2Q8IWL1 248 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 SFRP1Q8N474 314 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 ARL14Q8N4G2 192 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 DCBLD1Q8N8Z6 715 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 AVL9Q8NBF6 648 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 MCUQ8NE86 351 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 CPT1BQ92523 772 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 SGSM3Q96HU1 749 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 OSGEPL1Q9H4B0 414 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 XAB2Q9HCS7 855 aaKnown RBP11.72□□□□□ -0.53
LIG3-213ENST00000590630 LRIT1Q9P2V4 623 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 SLC23A2Q9UGH3 650 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 RNF215Q9Y6U7 377 aa11.72□□□□□ -0.53
LIG3-213ENST00000590630 MAP1BP46821 2468 aaKnown RBP11.72□□□□□ -0.53
LIG3-213ENST00000590630 ANKRD11Q6UB99 2663 aaPredicted RBP11.71□□□□□ -0.53
LIG3-213ENST00000590630 KIR2DS5A0A0G2JLQ3 304 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 A0A0G2JNG1 304 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 CCDC162PA2VCL2 907 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 FAM149AA5PLN7 773 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 OR2AG2A6NM03 316 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 RHPN2P1A8MT19 583 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 KIR2DS3K7RE56 304 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 TMEM63AO94886 807 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 MT-CO3P00414 261 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 ATP1B2P14415 290 aaPredicted RBP11.71□□□□□ -0.53
LIG3-213ENST00000590630 GPR3P46089 330 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 CTSCP53634 463 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 MAZP56270 477 aaKnown RBP11.71□□□□□ -0.53
LIG3-213ENST00000590630 PRAMEP78395 509 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 B4GALNT1Q00973 533 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 DMPKQ09013 629 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 BIRC2Q13490 618 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 PTK6Q13882 451 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 SPIDRQ14159 915 aa11.71□□□□□ -0.53
LIG3-213ENST00000590630 KIR2DS5Q14953 304 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms