RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 ARHGEF17Q96PE2 2063 aaPredicted RBP13.67□□□□□ -0.22
ERCC1-208ENST00000589165 ZFYVE26Q68DK2 2539 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 A0A087WV48 116 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 CCDC187A0A096LP49 1063 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 AGAP14A8MT82 685 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 LDB2O43679 373 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 KCNJ13O60928 360 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 KRT37O76014 449 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 SRP72O76094 671 aaKnown RBP13.67□□□□□ -0.22
ERCC1-208ENST00000589165 FGGP02679 453 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 ALDH4A1P30038 563 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 FDFT1P37268 417 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 HADHAP40939 763 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 MLLT3P42568 568 aaPredicted RBP13.67□□□□□ -0.22
ERCC1-208ENST00000589165 INHBCP55103 352 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 OR1D5P58170 312 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 ERVPABLB-1P60509 514 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 XIAPP98170 497 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 NFATC2Q13469 925 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 GTF2H3Q13889 308 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 GPRC6AQ5T6X5 926 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 CRTC3Q6UUV7 619 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 C11orf96Q7Z7L8 435 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 LINC00523Q86TU6 105 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 PIM3Q86V86 326 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 SLITRK4Q8IW52 837 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 COL27A1Q8IZC6 1860 aaPredicted RBP13.67□□□□□ -0.22
ERCC1-208ENST00000589165 PRR11Q96HE9 360 aaPredicted RBP13.67□□□□□ -0.22
ERCC1-208ENST00000589165 TTC25Q96NG3 672 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 FKBPLQ9UIM3 349 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 SATB2Q9UPW6 733 aa13.67□□□□□ -0.22
ERCC1-208ENST00000589165 DRG1Q9Y295 367 aaKnown RBP13.67□□□□□ -0.22
ERCC1-208ENST00000589165 IGHV1OR21-1A0A087WYE8 117 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 GPR39O43194 453 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 TLX3O43711 291 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-208ENST00000589165 SUN1O94901 812 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 IFNB1P01574 187 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 PSMA3P25788 255 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 CD1CP29017 333 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 CA5AP35218 305 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 GPLD1P80108 840 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 INSCQ1MX18 579 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 WASH2PQ6VEQ5 465 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 SLC9B2Q86UD5 537 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 TRAPPC5Q8IUR0 188 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 RASGEF1AQ8N9B8 481 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 OR13C4Q8NGS5 318 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 TMEM159Q96B96 161 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 SH3KBP1Q96B97 665 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 FOXP3Q9BZS1 431 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 STN1Q9H668 368 aaKnown RBP13.66□□□□□ -0.22
ERCC1-208ENST00000589165 ETNK1Q9HBU6 452 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 ASCL3Q9NQ33 180 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 WASH6PQ9NQA3 447 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 PRDM8Q9NQV8 689 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 HOMER3Q9NSC5 361 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 ATXN7L1Q9ULK2 861 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-208ENST00000589165 JRKLQ9Y4A0 524 aa13.66□□□□□ -0.22
ERCC1-208ENST00000589165 DNMT3AQ9Y6K1 912 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-208ENST00000589165 TRBV23OR9-2A0A075B6M9 112 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 H7C0S8 307 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 PLD2O14939 933 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 SNX2O60749 519 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 TPH1P17752 444 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 VCLP18206 1134 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 XRCC1P18887 633 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-208ENST00000589165 EIF2S3P41091 472 aaKnown RBP13.65□□□□□ -0.22
ERCC1-208ENST00000589165 CTSCP53634 463 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 HHEXQ03014 270 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 DMPKQ09013 629 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 CDH17Q12864 832 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 SEMA5AQ13591 1074 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 SNX1Q13596 522 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 LONRF2Q1L5Z9 754 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 AMZ1Q400G9 498 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 GPR33Q49SQ1 333 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 AGAP9Q5VTM2 703 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 ABRAXAS1Q6UWZ7 409 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 C4orf22Q6V702 233 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 TMPRSS9Q7Z410 1059 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 SNX20Q7Z614 316 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 CCDC89Q8N998 374 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 ULK4Q96C45 1275 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 ZNF514Q96K75 400 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-208ENST00000589165 DPYSL5Q9BPU6 564 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-208ENST00000589165 ASB8Q9H765 288 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 EPB41L5Q9HCM4 733 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 THSD1Q9NS62 852 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 KCNK4Q9NYG8 393 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 PAK5Q9P286 719 aa13.65□□□□□ -0.22
ERCC1-208ENST00000589165 ZFC3H1O60293 1989 aaKnown RBP13.64□□□□□ -0.23
ERCC1-208ENST00000589165 MROH6A6NGR9 719 aa13.64□□□□□ -0.23
ERCC1-208ENST00000589165 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
ERCC1-208ENST00000589165 CEP104O60308 925 aa13.64□□□□□ -0.23
ERCC1-208ENST00000589165 ITGA2BP08514 1039 aa13.64□□□□□ -0.23
ERCC1-208ENST00000589165 ITGALP20701 1170 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms